Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01001 ATGGATGACAACCCTTTTCCAAACGTCCCACTGCCACCCCCACCAATACAAGTCCCTGATAACTTCCTTCTCTCTTCCTCCTCTTCGCCAACCCCAACCACGTCCTCTCCGTCTCCCACTCCTTCCACCGCCGTCCGCTACAGGGGGACGCGCTGCCGTAGCGGTAAGTGGGTGTCCGAGATAAGGGAGCCACGTAAAACCAAGCGCATTTGGCTCGGGACTTACCCTGCAGCGGAAATGGCTGCGGCCGCTTATGATGTTGCGGCTCTCGCGTTGAAGGGACCCGACACGCCCCTTAACTTTCCCAATTCCATACTCTCGTACCCGATTCCCGCGTCATTGTCGGCTACCGATATTCGCGCTGCGGCTGCGGCTGCTGCGCAGGCCAGGATCGTGAGGGCGCCGCAGGAGAGTGGGCAAGCGGTAAACCCTCATATTGGACAGGAGTTGGAAAGGCGTGAGGAGTACTATGATGAGGATGAGTTGTTGAACATGCCGAATTTGCTTGATGAAATGGCCAGGGGAATGCAGGATGCTGCTGGGAAGGTTGCGATAAGGTGTATATGGAATGGGATAAGGTCAAGGAATGAGATAAGGTTACTTTCATCATCGCTGGGTTTGGTGAGAGATGCCACCGGTTTTAGGGAATGGTTTATGTGA 660 0.55 MDDNPFPNVPLPPPPIQVPDNFLLSSSSSPTPTTSSPSPTPSTAVRYRGTRCRSGKWVSEIREPRKTKRIWLGTYPAAEMAAAAYDVAALALKGPDTPLNFPNSILSYPIPASLSATDIRAAAAAAAQARIVRAPQESGQAVNPHIGQELERREEYYDEDELLNMPNLLDEMARGMQDAAGKVAIRCIWNGIRSRNEIRLLSSSLGLVRDATGFREWFM* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01001 219 SMART rav1_2 46 108 IPR001471 GO:0003700|GO:0006355
Phac7g01001 219 Pfam AP2 domain 51 94 IPR001471 GO:0003700|GO:0006355
Phac7g01001 219 MobiDBLite consensus disorder prediction 20 47 - -
Phac7g01001 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 31 172 - -
Phac7g01001 219 MobiDBLite consensus disorder prediction 1 48 - -
Phac7g01001 219 ProSiteProfiles AP2/ERF domain profile. 46 102 IPR001471 GO:0003700|GO:0006355
Phac7g01001 219 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Phac7g01001 219 SUPERFAMILY DNA-binding domain 47 104 IPR016177 GO:0003677
Phac7g01001 219 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01001 Phac-Chr7 6200554 6201576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01001 47 176 AP2-EREBP Transcription Factor Family AT5G52020 58.156 1.31e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g01001 AP2 3.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01001 - - gmx:100776717 243.432