Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00963 ATGAATCCTTTACACCCTAGTGATGAGTTGTACTCTCAGATTACAACTGATGATTACTGCTCCCTACCAATCCAAACAACCACTCTACAAAATCAGATCTTGTGTGGTCCTATGATGGATGGTAGTGCTCTCATTCCGTGTACAGGTCAAATGGAAACTACCAAGGGCAAGCACAGAAACGAGGATTATAAGATCACCACCATAGATGAAAACAAGAAGTGGATGCATAGAGAGACCGAAAAACAAAGAAGGCAAGAAATGACCAGGCTTTGCACCCACTTTAGATCTCTTCTACCTCTTGAATATATTAAGGGAAAGCGCTCGATTTCTGATCTTATGCATGAGGGTTCAAATTACATCAAACACCTTGAAAACAAAGTGAAACAGTTGGAAGCTAAGAGAGACAAGTTTAAGAAGTTGTCCAATTTGATTCCTGTTGTTTCTGATAGTGGAAGCTTTAGCACTACCCATTTTCCAATATGTGTCCTTGTTCATCCTTTTCTAGGAGGTGTTCAGATTAAGTGTAGTTATAGTTTCAGAAAATATGTCTTTCCTTTGTCAAGAGTGATAGATATGGTGCTTAAAGAAGGGCTTGATGTGGTCAACTGTACCTCCACCAAAACAGATGACAGGTTCATACACACTATCCGATTAGAGGTTCCACATATGATGACTGGAACTAATTACACTGAACTGCAAAGGAAGCTGGTCGAAGCAATATCATCATCTTCAAGTTCGGAGGAGATAGTATCTGAACATGAAAAGTGCTGA 771 0.3969 MNPLHPSDELYSQITTDDYCSLPIQTTTLQNQILCGPMMDGSALIPCTGQMETTKGKHRNEDYKITTIDENKKWMHRETEKQRRQEMTRLCTHFRSLLPLEYIKGKRSISDLMHEGSNYIKHLENKVKQLEAKRDKFKKLSNLIPVVSDSGSFSTTHFPICVLVHPFLGGVQIKCSYSFRKYVFPLSRVIDMVLKEGLDVVNCTSTKTDDRFIHTIRLEVPHMMTGTNYTELQRKLVEAISSSSSSEEIVSEHEKC* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00963 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 139 IPR036638 GO:0046983
Phac7g00963 256 Gene3D - 64 145 IPR036638 GO:0046983
Phac7g00963 256 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 61 238 - -
Phac7g00963 256 FunFam Transcription factor bHLH126 63 150 - -
Phac7g00963 256 Coils Coil 113 143 - -
Phac7g00963 256 CDD bHLH_AtORG2_like 72 142 - -
Phac7g00963 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Phac7g00963 256 Pfam Helix-loop-helix DNA-binding domain 73 124 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00963 Phac-Chr7 5951953 5953898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00963 69 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 39.884 8.07e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g00963 HLH 2.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00963 - - gmx:100803786 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00963 7 5951953 5953898 Phac7g00963 7 5951953 5953898 ECH