Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00962 ATGAATCCTTTACACCCTAGTGATGAGTTGTACTCTCAGATTACAACTGATGATTACTGCTCCCTACCAATCCAAACAACCACTCTACAAAATCAGATCTTGTGTGGTCCTATGATGGATGGTAGTGCTCTCATTCCGTGTACAGGTCAAATGGAAACTACCAAGGGCAAGCACAGAAACGAGGATTATAAGATCACCACCATAGATGAAAACAAGAAGTGGATGCATAGAGAGACCGAAAAACAAAGAAGGCAAGAAATGACCAGGCTTTGCACCCACTTTAGATCTCTTCTACCTCTTGAATATATTAAGGTAAACACCACAGCTATACACAATTATAGTATTTTTCATCTCATTAACAACCCATTCAAGGGCATTATTGCGCATCACATATTCAGTATATTATATCTTGATGGCCATCATCAGGGAAAGCGCTCGATTTCTGATCTTATGCATGAGGGTTCAAATTACATCAAACACCTTGAAAACAAAGTGAAACAGTTGGAAGCTAAGAGAGACAAGTTTAAGAAGTTGTCCAATTTGATTCCTGTTGTTTCTGATAGTGGAAGCTTTAGCACTACCCATTTTCCAATATGTGTCCTTGTTCATCCTTTTCTAGGAGGTGTTCAGATTAAGTGTAGTTATAGTTTCAGAAAATATGTCTTTCCTTTGTCAAGAGTGATAGATATGGTGCTTAAAGAAGGGCTTGATGTGGTCAACTGTACCTCCACCAAAACAGATGACAGGTTCATACACACTATCCGATTAGAGGTTCCACATATGATGACTGGAACTAATTACACTGAACTGCAAAGGAAGCTGGTCGAAGCAATATCATCATCTTCAAGTACAAATATTATTTATTTGCACAAGATTTTCATATATTTTCCTCTGATTTTGTCCGAATATTTACATAAGGAAAATTATTTTTTCATGTACGGTAGAATCCTTTTATAA 957 0.371 MNPLHPSDELYSQITTDDYCSLPIQTTTLQNQILCGPMMDGSALIPCTGQMETTKGKHRNEDYKITTIDENKKWMHRETEKQRRQEMTRLCTHFRSLLPLEYIKVNTTAIHNYSIFHLINNPFKGIIAHHIFSILYLDGHHQGKRSISDLMHEGSNYIKHLENKVKQLEAKRDKFKKLSNLIPVVSDSGSFSTTHFPICVLVHPFLGGVQIKCSYSFRKYVFPLSRVIDMVLKEGLDVVNCTSTKTDDRFIHTIRLEVPHMMTGTNYTELQRKLVEAISSSSSTNIIYLHKIFIYFPLILSEYLHKENYFFMYGRILL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00962 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 161 IPR011598 GO:0046983
Phac7g00962 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 176 IPR036638 GO:0046983
Phac7g00962 318 Coils Coil 151 181 - -
Phac7g00962 318 Gene3D - 61 179 IPR036638 GO:0046983
Phac7g00962 318 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00962 Phac-Chr7 5951953 5953218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00962 66 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 32.710 4.69e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g00962 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00962 - - gmx:100803786 358.221