Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00959 ATGTTTCCTTTACAACGCGGCAATGAGCTGGTGATCCAATTTTCTAATGGTCTCCAACCGCAACACAAAATCTCTAAAGATCTCATCCTGGATGATCACAATATCGATAATTCTCCCCTTGTCGCTTATTCAGATAAAAAATTGCGTACTAGCCACCCCAACAAACTTTTTTATGCGTCTGAAACCAGTCAGGCTAATTCTACCCAAGAAGAATCTGCAAAAAAGATGGTTCACAGGGACATTGAGAGGAAAAGGAGGCAAGAAATGGCAACCCTTCATGCCTCTCTTAGATCCCTTCTCCCTCTTCCCTTCATCAAGGTCAGCCAATTAATTATCCCTCTACTTTTCCATTTCTTTCCTTTTTTTCTTGATTGTGTTCCGCTTAGGGTTATTATTAGTACTATTCTTTTTCTATTGGAGTTTCAGGGAAAGCGTTCCATATCTGATCAAATGAGTGAGGCAGTGAATTACATAAACCACCTGCAGAAGAATATTAAAGAGTTGAGTGACAAGAGGGACAAGCTGAAGAAGAAACTTCTCATAAACTCCACCCTCGAAAGCCGTGAGAACAAGCATGAATCTAGGGGTTTCACTGTCCACCAAAATAGTAGTGGAGCTGTGGGGATTGAAATCAGTGGATTAAGTGAGGAAGGGGTTTCACTTTCTAAATTGCTGGAACTAGTGTTAGAAGAGGGACTTGAAGTTGTTTGCTGTCTTTCAACTAAAGTCAATGGCAGATTACTCCACAGTTTGCAGTGTGAGGTTGAAAATTCCGACAGTGTAGATCTATCTGAGCTGAGAAGAAAATTTTCCAATGTAATTGCATCGTTTAGAGTTTCTGAATAA 846 0.4019 MFPLQRGNELVIQFSNGLQPQHKISKDLILDDHNIDNSPLVAYSDKKLRTSHPNKLFYASETSQANSTQEESAKKMVHRDIERKRRQEMATLHASLRSLLPLPFIKVSQLIIPLLFHFFPFFLDCVPLRVIISTILFLLEFQGKRSISDQMSEAVNYINHLQKNIKELSDKRDKLKKKLLINSTLESRENKHESRGFTVHQNSSGAVGIEISGLSEEGVSLSKLLELVLEEGLEVVCCLSTKVNGRLLHSLQCEVENSDSVDLSELRRKFSNVIASFRVSE* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00959 281 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 63 272 - -
Phac7g00959 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 161 IPR011598 GO:0046983
Phac7g00959 281 Pfam Helix-loop-helix DNA-binding domain 74 162 IPR011598 GO:0046983
Phac7g00959 281 Coils Coil 151 178 - -
Phac7g00959 281 Gene3D - 64 178 IPR036638 GO:0046983
Phac7g00959 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 180 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00959 Phac-Chr7 5943428 5944883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00959 70 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25400 38.830 3.99e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g00959 HLH 1.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00959 - - pvu:PHAVU_007G064300g 379.022