Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00944 ATGAATGCTAGGTATCCTCATTGTCTTTATTTTCTTGAGCTGCTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCTACTAATAAGGAGCTTGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAGATCACTTCCTGAACCTAGTGCCACATCTGCAGTTCCTGCTCCCGTTTCAACTACAGCTCAGGCACCTGTATCTGCACTGCCACCAGTACCTGCTACAAGCGTTGCTGTGACATCAACACCTGCTCAAGCTCCTTCTCCTATGCCATATGGTATGCCCCCTGGCTCTGGTCTAGCTAAAAATGACATGAGGAATCCTGCAGTTGACAATAGAAGGAAGAGAAAGTGA 390 0.4436 MNARYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATSAVPAPVSTTAQAPVSALPPVPATSVAVTSTPAQAPSPMPYGMPPGSGLAKNDMRNPAVDNRRKRK* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00944 129 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 5 129 IPR008831 GO:0003712|GO:0006355|GO:0016592
Phac7g00944 129 Pfam SOH1 4 44 IPR008831 GO:0003712|GO:0006355|GO:0016592
Phac7g00944 129 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 2 41 IPR038089 -
Phac7g00944 129 MobiDBLite consensus disorder prediction 91 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00944 Phac-Chr7 5816030 5818611 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Phac7g00944 Med31 3.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00944 K15153 - gmx:100527879 230.72