Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00943 ATGGCCTCTAAAAACGAAAGCGATAATTCAACCGATACTTCTCCATCATCGCCAAAGAACATATACAAAGATCCAGATGATGGGCGGCAACGGTTTTTGCTTGAATTGGAGTTTGTTCAGTGCCTTGCTAATCCTACCTACATCCACTATTTGGCTCAGAATCGATATTTTGAGGATGAAGCATTCATTGGATACTTAAAGTATCTTCAATATTGGCAGCGCCCTGAATATATTAAATTTATTATGTATCCTCATTGTCTTTATTTTCTTGAGCTGCTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCTACTAATAAGGAGCTTGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAGATCACTTCCTGAACCTAGTGCCACATCTGCAGTTCCTGCTCCCGTTTCAACTACAGCTCAGGCACCTGTATCTGCACTGCCACCAGTACCTGCTACAAGCGTTGCTGTGACATCAACACCTGCTCAAGCTCCTTCTCCTATGCCATATGGTATGCCCCCTGGCTCTGGTCTAGCTAAAAATGACATGAGGAATCCTGCAGTTGACAATAGAAGGAAGAGAAAGTGA 624 0.4199 MASKNESDNSTDTSPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATSAVPAPVSTTAQAPVSALPPVPATSVAVTSTPAQAPSPMPYGMPPGSGLAKNDMRNPAVDNRRKRK* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00943 207 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Phac7g00943 207 MobiDBLite consensus disorder prediction 1 20 - -
Phac7g00943 207 FunFam Mediator of RNA polymerase II transcription subunit 31 18 119 - -
Phac7g00943 207 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 207 IPR008831 GO:0003712|GO:0006355|GO:0016592
Phac7g00943 207 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Phac7g00943 207 MobiDBLite consensus disorder prediction 1 24 - -
Phac7g00943 207 MobiDBLite consensus disorder prediction 165 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00943 Phac-Chr7 5816030 5818611 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Phac7g00943 Med31 1.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00943 K15153 - gmx:100527879 388.267