Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00942 ATGTATCCTCATTGTCTTTATTTTCTTGAGCTGCTTCAGAATGCAAATTTTCGCAATGCAATGGCACATCCTACTAATAAGGAGCTTGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGGCTAAAACACATTTTACCAAGATCACTTCCTGAACCTAGTGCCACATCTGCAGTTCCTGCTCCCGTTTCAACTACAGCTCAGGCACCTGTATCTGCACTGCCACCAGTACCTGCTACAAGCGTTGCTGTGACATCAACACCTGCTCAAGCTCCTTCTCCTATGCCATATGGTATGCCCCCTGGCTCTGGTCTAGCTAAAAATGACATGAGGAATCCTGCAGTTGACAATAGAAGGAAGAGAAAGTGA 381 0.4436 MYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATSAVPAPVSTTAQAPVSALPPVPATSVAVTSTPAQAPSPMPYGMPPGSGLAKNDMRNPAVDNRRKRK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00942 126 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 126 IPR008831 GO:0003712|GO:0006355|GO:0016592
Phac7g00942 126 MobiDBLite consensus disorder prediction 87 126 - -
Phac7g00942 126 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 1 38 IPR038089 -
Phac7g00942 126 Pfam SOH1 2 41 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00942 Phac-Chr7 5816030 5818611 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Phac7g00942 Med31 6.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00942 K15153 - gmx:100527879 232.646