Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00940 ATGCCAGTGAGGCAGATGAAAGAAAGCTCGGAGCAACACCTTGTGATCAAACCCCATTTGCAGAATCCTATGAATCCAGCCAAGAAGACAACCAAAGCTGCCCAAAATGGCAAAGGTCCACCGCCACTAGAAAACGATAGCCAAGCTTTCCCTCACTCAAAGAACAAGGGAAGAAGAAGGGGGAGAGGTGGCAGAAAACCCGATCAAGGAGATGTTATGATGAGGCCTAGATGCAGACCATGCACTGCAACACTTACAAGTAGTGCAAATGGGAATGTTGAAAATGATTTCGTCTCTGATATGGGTTTTCCCACTTCAAGCAAGTCTTTGAGCTTTGCTCGTAGGCCTGGATATGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATGTTACTATTACCCCAGAAGTGTCTTCTAAAACAGTAAACAGGTCTATCATAGCAGAGCTGGTGAGGCTCTATAAAGAGTCTGACTTGGGGATGAGACTTCCAGCATATGATGGCAGAAAAAGTCTGTACACAGCAGGGCAGCTTCCCTTTGCTTGGAGAGAGTTTAAGATTAAGCTTGTAGATGAAGAGGAAGGAGTTAATGGCCCCAAAAGGGAAAGAGAATACAGGGTGGCGATCAAATTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTCCTAGCTGGTAAGCGTGCTGATGCACCCCAAGAGGCACTTCAAATCCTGGACATTGTACTAAGAGAGCTGGCAACTAAGAGGTATTGCCCAATTGGAAGGTCCTTCTTTTCACCCGATATTAGAACACCACAACGGCTTGGAGAAGGATTAGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACACAAATGGGCCTTTCCCTCAATATTGATATGGCATCTGCTGCATTTATTGAGCCACTTCCAGTAGTGGAATTTGTTGGGCAGCTATTAGGGAAAGATGTGATGTCAAGGCCATTGTCAGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACATAGAGGGAGTGTGAGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGGGAACTGGTGTTCCCTGTTGATGAGAACTCAACTATGAAATCAGTAGTTGAATACTTTCAAGAGATGTATGGCTTCACTATTCAATATACTCACCTTCCTTGCCTTCAAGTGGGAAACCAAAAGAAGGCCAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACAAAAAGATTGAATGAGAAGCAAATCACTGCTCTATTGAAAGTTACTTGCCAGAGACCTCGTGATCGTGAAAATGACATTTTACGGACCATTCAACAAAATGCTTATGATCAAGATCCGTATGCAAAGGAATTTGGAATTAAAATCAGTGAAAAACTAGCTTCTGTTGAAGCACGAATTCTTCCAGCCCCTTGGCTTAAATATCACGAAAGTGGGAAAGAAAAGAACTGCTTACCCCAAGTTGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAACCGGTGGGCATGCATAAATTTTTCACGGAGTGTGCAAGATAGTGTTGCTCGCACCTTTTGCAATGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCATATACAATGCCAAGCCTGAACAGGTGGAGAAAGCTTTGAAACATGTGTACCATGTGTCAGCGAGCAAAACTAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCAGACAATAACGGGTCTCTCTATGGTGATCTAAAGCGAATTTGTGAAACTGACCTTGGCTTAATTTCACAATGCTGTCTGACAAAGCATGTCTTCAAAATCACTAAACAGTACTTAGCGAACGTGTCTCTGAAGATCAATGTGAAGTGGTCACATGCCCTCCTCCCGGTGCAGATGGGAGGTAGAAATACTGTACTTCTTGATGCTGTGAGCTGCAGAATACCGTTGGTCAGTGACATACCAACCATAATTTTCGGAGCAGATGTAACCCACCCTGAAAACGGCGAAGACTCAAGCCCCTCAATTGCAGCTGTAGTAGCATCTCAGGACTGGCCTGAAGTAACAAAATACGCCGGTTTAGTGTGCGCTCAAGCTCATCGGCAGGAACTTATACAAGACTTGTACAAAACTTGGCACGACCCTGTTCGTGGCACAGTCAGTGGAGGCATGATCAGAGATTTACTGGTTTCCTTTAGGAAGGCAACAGGACAAAAGCCGCTACGAATTATATTTTACAGGGATGGTGTCAGCGAAGGGCAATTTTACCAAGTTTTACTTTATGAGTTGGATGCGATTCGAAAGGCATGTGCTTCCTTAGAACCAAATTACCAGCCTCCAGTAACTTTCATAGTCGTTCAAAAAAGACATCATACTCGGCTATTCGCAAACAACCACAGGGATAGAAGCAGTACAGATAGGAGTGGGAATATATTGCCTGGGACTGTTGTTGATTCCAAAATCTGCCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACTAGTAGGCCAGCTCATTATCATGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACAAACAATCTTTGTTATACATATGCAAGGTGTACACGCTCAGTATCTGTTGTTCCCCCAGCATATTATGCGCATTTAGCAGCCTTTCGAGCCCGTTTCTACATGGAACCAGATATGCAAGAGAATGGATCTACAGGTGAGGGTAATGGTCATAGTTCGAAAGGAACACGAGCAGCTGGAGATTATACTGTGAAGCCATTGCCAGACTTGAAAGAAAATGTGAAGAGAGTGATGTTTTACTGTTAG 2952 0.4336 MPVRQMKESSEQHLVIKPHLQNPMNPAKKTTKAAQNGKGPPPLENDSQAFPHSKNKGRRRGRGGRKPDQGDVMMRPRCRPCTATLTSSANGNVENDFVSDMGFPTSSKSLSFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSKTVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLVDEEEGVNGPKREREYRVAIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELATKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVMSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQQNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSASKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKWSHALLPVQMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGEGNGHSSKGTRAAGDYTVKPLPDLKENVKRVMFYC* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00940 983 Pfam PAZ domain 346 450 IPR003100 GO:0005515
Phac7g00940 983 Pfam Mid domain of argonaute 517 594 IPR032473 -
Phac7g00940 983 Gene3D - 686 983 IPR036397 GO:0003676
Phac7g00940 983 ProSiteProfiles PAZ domain profile. 320 434 IPR003100 GO:0005515
Phac7g00940 983 SMART DUF1785_2 267 319 IPR014811 -
Phac7g00940 983 FunFam protein argonaute 10-like 686 983 - -
Phac7g00940 983 CDD PAZ_argonaute_like 319 433 - -
Phac7g00940 983 ProSiteProfiles Piwi domain profile. 608 938 IPR003165 GO:0003676
Phac7g00940 983 SMART Piwi_a_2 608 938 IPR003165 GO:0003676
Phac7g00940 983 CDD Piwi_ago-like 478 937 IPR045246 -
Phac7g00940 983 Pfam Argonaute linker 2 domain 460 506 IPR032472 -
Phac7g00940 983 FunFam Protein argonaute-2 313 439 - -
Phac7g00940 983 Pfam Piwi domain 609 937 IPR003165 GO:0003676
Phac7g00940 983 Pfam N-terminal domain of argonaute 124 258 IPR032474 -
Phac7g00940 983 SUPERFAMILY PAZ domain 314 474 IPR036085 GO:0005515
Phac7g00940 983 Gene3D paz domain 313 438 - -
Phac7g00940 983 MobiDBLite consensus disorder prediction 1 77 - -
Phac7g00940 983 MobiDBLite consensus disorder prediction 942 965 - -
Phac7g00940 983 SMART PAZ_2_a_3 324 456 IPR003100 GO:0005515
Phac7g00940 983 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 104 939 - -
Phac7g00940 983 Gene3D - 498 679 - -
Phac7g00940 983 FunFam Argonaute 10 498 680 - -
Phac7g00940 983 Pfam Argonaute linker 1 domain 268 317 IPR014811 -
Phac7g00940 983 SUPERFAMILY Ribonuclease H-like 600 939 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00940 Phac-Chr7 5779982 5788061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00940 1 983 Eukaryotic Initiation Factors Gene Family AT5G43810 80.575 0.0 1654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00940 K11593 - gmx:100816999 1896.71