LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g00927	ATGGAGGAAGAGAGCGAATGCTTCGAGTGCCTCCAACTTCGAATAAAGTCGGATTTCTCGGAGCAAGTCTTCTTCAATTATGCCATCTCCAATTCTGCTTTTCCTTTCGGATCCTCAGCTATCGTCAATATTTCTGGTACAACTGATGGCGAAGCTTCCGGCGGTCAATTTATATTGCAATACATGCCGAGTCGTGATAAGAATTGTTTTATCAATTATGTAAATGAATATAGTTTGGACAGTGGTGAAATCACTATCAGGAGTGGTGATCCTGATATTGGTGGAAGTAAAGATAATAATGTTATTAAGGGTAGAATTACTTCATCAGATGATTCTTACTGTGGGAAAGATTTGTCAGGAAACACAAATTGTAGTCATTCTGGAAGGTTTTCTTGCTCGAGGGCAATCACCTCACTCTTACCGATTGCTCATGTGGGAATGTCTTCCTATTCTGCGTTTCAAAAGGTGTCCTCTGATTTCTTGTCTGGTTTAATTGAAGACCATGTGTTAGATTCGCTTGATCTCTTCATTGAAGAGAAAGCTTCTGGACGGGACAGCGTAAATTTTCTTAGTTTAATTGGGTTGCCATCATTTGAAGAGGAAGCTTTTCCAGGCTCTTTGAGGCATCCTAACATAGCTCCAGTCCTTGCGATTTTTAAAACAACTGATCATGTTAATGTGGTGCTTCCAAAGACTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCCAATGCCTTAAAGTCTGATTGGAATAGAAGATTTCTTATATATCAACTACTCTCAGCCTTATCGTATGTACATGGTTTAGGGGTTTCTCATGGTAACATTCGCCCATCCAATATCATGTTGACTGATTCGTTATGGTGTTGGCTGAGATTATGGAGTGAGCCTGTATTGGAATCTAATTTAACTTTGCAGGAGAATGAAAGCGCTAATTCTGAACCTGCAAGAATTGGTTGTTGTAATGTTGGTTGTCATTCTTATGGCCTTTATGCTGATCTAATGCTTTCTCCAACAATAGATTGGCATGCTTGCTTTCAGCAGTGGTGGAGAGGAGAAATAAGTAATTTTGAATATTTACTGATCTTAAACAGATTATCAGGAAGAAGATGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCTCAAAACCTGATGATAATTGTGATGTTGGGTGGCGAGACTTGAGCAAGAGTAAATGGCGCTTGGCAAAAGGCGATGAACAATTGGATTTCACATATTCAACGTCTGAAATCCCTCATCATGTTTCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGACTGCCTTTGAGTGTTCTCAGAATAGCTGTTCGTTCCGTGTATGAACCTAATGAGTATCCTTCCACAATGCAGAGGCTCTATCAATGGACTCCCGATGAATGCATTCCAGAGTTTTACTGTGATGCTCAAATTTTTAAGTCAATACATGATGGTATGGCTGATTTGGCTGTACCCTCTTGGGCAGAGAGTCCTGAGGATTTCATTAAATTGCATTTTGATGCATTAGAAAGTGATAGGGTGTCATTTCAACTCCATCATTGGATAGATATAACCTTTGGTTATAAGATGTCTGGCCAGGAAGCTATCGCTGCTAAGAATGTTATGCTTCCTCTATCAGAACCCTCGATGCCAAGATCAACAGGACGTCGTCAGCTTTTTACACAACGACACCCCATGCGTCATGCCACTACCAAAACAAAGCGTCATGGTTCCAATAAATATGCCAAAGTTTCGAGTCAGGCATATGAAATGCAGCGAGAGACATCTCTTCTATCTGGAACTGCTTATCTACAAGAACTAGAGCAAGCATCTAAATTTTCTGAACATGCTAGGCATTTGAATGCCTGTTACCATTATCCCTCAAATCAAATGACGGGGAAGAACATCTCATCTTTGGGATATTCATCATCCGAGACATTTAGTGAAAATATAAGCAAACTATCTTTGATTGACAGAAATTACCGGGTGCCGTGTAAAATGAATCTAATTTCTTTTCTTCAACATATCAAAGAGGAAGATGAAGGCTCCTCAGGATATCCAGACTTGCTACTCTGGAAGCAGAAATTATCTTCTTCAAGACTTTGCTCTGAAGATGTTGCTAGGGACATATTTTCTATTGGTTGTCTCTTGGCTGAACTTCATCTTTCCAGGCCACTCTTTGATCCAATCTCATTGTCAATATACTTGGAAGATGGAACCTTTCCAGGATTTCTGCAGGATCTACCTCCTAATATTAGATTACTTGTTGAAGCATGCATCCAAAAGGATTGGACGAGGAGGCCATCTACCAAAATTCTTCTGGAATCACCTTATTTTCCAAAGACTGTCAAGTCCTCGTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAACAGGAAACTCGTCTTCGTTATGCTGCTAATTTTGCAAAGCACGGAGCTCTCAGGGAAATGGGTGCATTTGCAACTGAAATGTGCGCTACTTATTGCTTATCACTTATAGTGAATGCTGTGAGTGATATTGAAGCTGAATGGGCATATATGCTTCTGAAGGAATTCATGAGATGCTTAAGAGTGCAAGCAGTGAAAACATTAATCCTGCCAACAATACAGAAAATTTTACAGACCACAGGTTATTTACGTTTAAAGGTTGCACTTCTACAAGATTCATTTGTAAGGGAAATATGGAATAAAGTTGGTAAACAAGCATACCTCGAAACTATTCATCCATTGGTCTTGTCAAACTTGTATATTTCTCCAGATAAAAGTTCAGGTGCCTCTGCTTCAGTGCTTCTAATCAGTTCTAGCGAGGAGCTTGGAGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTCGGGAAAGGACTATGTGCGGATGGCATTGATGTGCTGGTCAGAATTGGTGGCATTTTTGGGGAATTGTTTATTGTCAAACATATGGTACCTTTACTCAAAAATGTTGTTCGTTCATTCATTGATGTGTCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGACTGCTTTGGCACTTATTGATTGCCTGATGACTTTAGATGGACTTATAGCTTTCTTGACAGAAGAGGTCATTGTAAAGGAGCTTCTTGAAGACCTAAGTTGCATACACATTGGGATTCTTATGCAGAAACATGTGGACATTGCAGTGCTTCAGATTGCTGCTTCTACTCTTTTTGGAATTTGTCAGTGGATTGGAGCAGATTTGACAGCATTGCATATTCTTCCAAAACTTAAAGAACTATTTGATGAGCTGGCTTTCTCCCAGGAACTTTCTAAAGGTTCAACTACTGTTGGCAAAAACTTGAAGGTTGGCAAAATAAAAATTGGAGGGGACTTGCATATTGAAAGTCGTATGGATCTAGTGTTGGTACTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGATTCTTGAACAACATCTTCTACGTCATCATAATTGGAAGTGGGAATATGCAGGAGAATCATCAAAAAATGGTTCAGAAATTATTCTTGCTAGAAGACCTGTAATATCCCAAGGATTTACATCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGAGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTGCCAAAAATTTGATTCCTCAAAGACGACCATTTAAAGTTCATCAAAGTCCAGTAGTAGTGCATGAAGGAATGTCATACCAAATGACCCATGAACCCTGGTTTTGGTTCCCCAGTCCAGCCACCATCTGGGATGGGCCTGAATTTCTTGGGAGGGTGGGGGTTCAGAAAGATGATCTTCCATGGAAGATCAGAGCATCTGTTATATACTCTATACGTGCACATCATGGAGCAGTGAGGTCTCTGGCTGTTAACCAAGATGAATGTACTGTTTTTACTGCAGGAATTGGCCAAGGATACAAGGGAACTGTTCAGAAATGGGAATTGAGCCGAACTAACTGTTTGTCCGGCTATCATGGCCATGAGGAGAGAACTAAACAGTACTGTCATGTATCAACTCCGGTTTCAAATTATCAATATGCAAATTGCAAAGTACAAAGTGGAGCACGATGGATGGCTATTTAA	4158	0.4009	MEEESECFECLQLRIKSDFSEQVFFNYAISNSAFPFGSSAIVNISGTTDGEASGGQFILQYMPSRDKNCFINYVNEYSLDSGEITIRSGDPDIGGSKDNNVIKGRITSSDDSYCGKDLSGNTNCSHSGRFSCSRAITSLLPIAHVGMSSYSAFQKVSSDFLSGLIEDHVLDSLDLFIEEKASGRDSVNFLSLIGLPSFEEEAFPGSLRHPNIAPVLAIFKTTDHVNVVLPKTPYNLESILHFNPNALKSDWNRRFLIYQLLSALSYVHGLGVSHGNIRPSNIMLTDSLWCWLRLWSEPVLESNLTLQENESANSEPARIGCCNVGCHSYGLYADLMLSPTIDWHACFQQWWRGEISNFEYLLILNRLSGRRWGDHTFHPVMPWVIDFSSKPDDNCDVGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRIAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFKSIHDGMADLAVPSWAESPEDFIKLHFDALESDRVSFQLHHWIDITFGYKMSGQEAIAAKNVMLPLSEPSMPRSTGRRQLFTQRHPMRHATTKTKRHGSNKYAKVSSQAYEMQRETSLLSGTAYLQELEQASKFSEHARHLNACYHYPSNQMTGKNISSLGYSSSETFSENISKLSLIDRNYRVPCKMNLISFLQHIKEEDEGSSGYPDLLLWKQKLSSSRLCSEDVARDIFSIGCLLAELHLSRPLFDPISLSIYLEDGTFPGFLQDLPPNIRLLVEACIQKDWTRRPSTKILLESPYFPKTVKSSYLFLAPLQLVAKQETRLRYAANFAKHGALREMGAFATEMCATYCLSLIVNAVSDIEAEWAYMLLKEFMRCLRVQAVKTLILPTIQKILQTTGYLRLKVALLQDSFVREIWNKVGKQAYLETIHPLVLSNLYISPDKSSGASASVLLISSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIVKHMVPLLKNVVRSFIDVSCMNKPDPVQSWTALALIDCLMTLDGLIAFLTEEVIVKELLEDLSCIHIGILMQKHVDIAVLQIAASTLFGICQWIGADLTALHILPKLKELFDELAFSQELSKGSTTVGKNLKVGKIKIGGDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQHLLRHHNWKWEYAGESSKNGSEIILARRPVISQGFTSEYNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRPFKVHQSPVVVHEGMSYQMTHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRASVIYSIRAHHGAVRSLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEERTKQYCHVSTPVSNYQYANCKVQSGARWMAI*	1386

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g00927	1385	PANTHER	GH12955P	3	1364	-	-
	Phac7g00927	1385	Pfam	Beige/BEACH domain	348	561	IPR000409	-
	Phac7g00927	1385	ProSiteProfiles	BEACH domain profile.	335	604	IPR000409	-
	Phac7g00927	1385	SUPERFAMILY	Protein kinase-like (PK-like)	205	292	IPR011009	-
	Phac7g00927	1385	Pfam	Protein kinase domain	203	285	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00927	1385	Gene3D	BEACH domain	339	599	IPR036372	-
	Phac7g00927	1385	ProSiteProfiles	Protein kinase domain profile.	139	791	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00927	1385	SUPERFAMILY	WD40 repeat-like	1298	1356	IPR036322	GO:0005515
	Phac7g00927	1385	SUPERFAMILY	Protein kinase-like (PK-like)	717	820	IPR011009	-
	Phac7g00927	1385	CDD	Beach	348	579	IPR000409	-
	Phac7g00927	1385	SUPERFAMILY	BEACH domain	325	579	IPR036372	-
	Phac7g00927	1385	SMART	Beach_2	347	579	IPR000409	-
	Phac7g00927	1385	Gene3D	Transferase(Phosphotransferase) domain 1	694	799	-	-
	Phac7g00927	1385	Gene3D	Transferase(Phosphotransferase) domain 1	199	296	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g00927	Phac-Chr7	5701460	5711690	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDKL-Cr	Phac7g00927		Beach	1.6e-44	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g00927	K17601		-	gmx:100809116	2492.23