Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00919 ATGAATCCTCAAGGTCGAGTGAAGGAAGAGTTTCTTGCAGAAAGTTCTTCCTTTTATGGTGGCTATGATCCGCAGCCAGTAATGATTGTTCCTCGACCAATTGAGGGGCTCCATGAAACTGGTCTTCCACCATTCCTCACAAAAACATACGACATTGTTGATGACCCTTCCACTAACCATATAATTTCCTGGAGCACGGGGAACAACAGCTTCATTGTGTGGGATCCACAGGCCTTTTCCATAACCCTTCTGCCCAAGTTCTTCAAGCACAACAATTTCTCCAGTTTTGTCAGGCAACTCAACACCTATGTTGATCCAGATAAGTGGGAATTTGCTAATGAGATGTTTCTTAGAGGGAAAAGGATTCTTTTGAAGAACATTAGAAGGCGGAAAACAAATCATCAGTCTCATGCGATGCAGCAAGGTGTGGATCCTTGTGTTGAGGTGGGGCAGTTTGGATTAGATAGAGAAGTTGATAGGTTGAAGCGTGACAGGCAAGTTCTTATGGGGGAGTTGGTGAAACTCAGACAACAGCAACAGAATACTAGAGTTCACATTCAAGCAATGGAAGGAAGGCTTAAAAGGACTGAACAGAAACAGCAACAAACGATGAATTTCTTGGCCAGGGTAATGCAGAATCCCAACTTCGTGCAACAATTGGTTCAGCAAAAGGAGCTGAGAAAGGAGATCGAGGAAGGTTTTTCCAAGAAGAGGAGGAGTCTTGATCAAGGACCTAGTAATGTTGTTGAAGTAGGAGAGTTAGATTGCGCTGAAGAGTACTCAAGATTCATTGAACTTGAACCACAAGTATACACTGACAAGGTATTGGAGTTTGAGGTACCTGATCTTGACCTTGGTTTGAATCTGGAGGAGCAAATTGGAAGGCAAAAGAGAATGGAGGGAGATTATATTCAACTTGAAAGTATAGATAAAGATATTGATGAGGTGTTTTGGCAAGATTTGCTCAAAGAGGACATTGAAGATCAAGGTGTACTAGGTGTTGATGTATTGGCTCAGCAACTTGGTTATTTGGCTTCTAGTTATAAATAG 1050 0.421 MNPQGRVKEEFLAESSSFYGGYDPQPVMIVPRPIEGLHETGLPPFLTKTYDIVDDPSTNHIISWSTGNNSFIVWDPQAFSITLLPKFFKHNNFSSFVRQLNTYVDPDKWEFANEMFLRGKRILLKNIRRRKTNHQSHAMQQGVDPCVEVGQFGLDREVDRLKRDRQVLMGELVKLRQQQQNTRVHIQAMEGRLKRTEQKQQQTMNFLARVMQNPNFVQQLVQQKELRKEIEEGFSKKRRSLDQGPSNVVEVGELDCAEEYSRFIELEPQVYTDKVLEFEVPDLDLGLNLEEQIGRQKRMEGDYIQLESIDKDIDEVFWQDLLKEDIEDQGVLGVDVLAQQLGYLASSYK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00919 349 SMART hsfneu3 41 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00919 349 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 243 IPR027725 -
Phac7g00919 349 SUPERFAMILY "Winged helix" DNA-binding domain 41 130 IPR036390 -
Phac7g00919 349 Coils Coil 158 178 - -
Phac7g00919 349 Gene3D - 37 132 IPR036388 -
Phac7g00919 349 FunFam Heat stress transcription factor B-4 37 131 - -
Phac7g00919 349 Pfam HSF-type DNA-binding 45 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00919 349 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00919 349 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00919 349 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00919 Phac-Chr7 5662114 5664541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00919 23 347 HSF AT3G22830 53.699 1.54e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac7g00919 HSF_DNA-bind 1e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00919 K09419 - gmx:100809515 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02205 1 31771236 31774959 Phac7g00919 7 5662114 5664541 PCT