Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00918 ATGAATCCTCAAGGTCGAGTGAAGGAAGAGTTTCTTGCAGAAAGTTCTTCCTTTTATGGTGGCTATGATCCGCAGCCAGTAATGATTGTTCCTCGACCAATTGAGGGGCTCCATGAAACTGGTCTTCCACCATTCCTCACAAAAACATACGACATTGTTGATGACCCTTCCACTAACCATATAATTTCCTGGAGCACGGGGAACAACAGCTTCATTGTGTGGGATCCACAGGCCTTTTCCATAACCCTTCTGCCCAAGTTCTTCAAGCACAACAATTTCTCCAGTTTTGTCAGGCAACTCAACACCTATGGGTTTAAAAAGGTTGATCCAGATAAGTGGGAATTTGCTAATGAGATGTTTCTTAGAGGGAAAAGGATTCTTTTGAAGAACATTAGAAGGCGGAAAACAAATCATCAGTCTCATGCGATGCAGCAAGGTGTGGATCCTTGTGTTGAGGTGGGGCAGTTTGGATTAGATAGAGAAGTTGATAGGTTGAAGCGTGACAGGCAAGTTCTTATGGGGGAGTTGGTGAAACTCAGACAACAGCAACAGAATACTAGAGTTCACATTCAAGCAATGGAAGGAAGGCTTAAAAGGACTGAACAGAAACAGCAACAAACGATGAATTTCTTGGCCAGGGTAATGCAGAATCCCAACTTCGTGCAACAATTGGTTCAGCAAAAGGAGCTGAGAAAGGAGATCGAGGAAGGTTTTTCCAAGAAGAGGAGGAGTCTTGATCAAGGACCTAGTAATGTTGTTGAAGTAGGAGAGTTAGATTGCGCTGAAGAGTACTCAAGATTCATTGAACTTGAACCACAAGTATACACTGACAAGGTATTGGAGTTTGAGGTACCTGATCTTGACCTTGGTTTGAATCTGGAGGAGCAAATTGGAAGGCAAAAGAGAATGGAGGGAGATTATATTCAACTTGAAAGTATAGATAAAGATATTGATGAGGTGTTTTGGCAAGATTTGCTCAAAGAGGACATTGAAGATCAAGGTGTACTAGGTGTTGATGTATTGGCTCAGCAACTTGGTTATTTGGCTTCTAGTTATAAATAG 1062 0.42 MNPQGRVKEEFLAESSSFYGGYDPQPVMIVPRPIEGLHETGLPPFLTKTYDIVDDPSTNHIISWSTGNNSFIVWDPQAFSITLLPKFFKHNNFSSFVRQLNTYGFKKVDPDKWEFANEMFLRGKRILLKNIRRRKTNHQSHAMQQGVDPCVEVGQFGLDREVDRLKRDRQVLMGELVKLRQQQQNTRVHIQAMEGRLKRTEQKQQQTMNFLARVMQNPNFVQQLVQQKELRKEIEEGFSKKRRSLDQGPSNVVEVGELDCAEEYSRFIELEPQVYTDKVLEFEVPDLDLGLNLEEQIGRQKRMEGDYIQLESIDKDIDEVFWQDLLKEDIEDQGVLGVDVLAQQLGYLASSYK* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00918 353 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00918 353 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00918 353 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00918 353 FunFam Heat shock transcription factor 1 38 135 - -
Phac7g00918 353 Gene3D - 37 136 IPR036388 -
Phac7g00918 353 SUPERFAMILY "Winged helix" DNA-binding domain 41 134 IPR036390 -
Phac7g00918 353 Coils Coil 162 182 - -
Phac7g00918 353 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 247 IPR027725 -
Phac7g00918 353 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00918 353 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g00918 353 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00918 Phac-Chr7 5662114 5664541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00918 23 351 HSF AT3G22830 54.521 9.72e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac7g00918 HSF_DNA-bind 3.2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00918 K09419 - gmx:100809515 555.444