Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00906 ATGAACGCCGGCGGAACCGCCACCTTCCGATCCATCCTCGACAAGCCCCTCAACCAGCTCACGGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCATGGAACAAATCGCAGGCGATCCAACAGGTCATTTCCCTCAAAGCGCTTCTCGAACCTTCCGACGATGATTCCCCTCCTCATCCTCCCCCCATGCACCACCATCCGCATGCGCCTCAACCTCAAGCCAATTTGACTCAACCTCCGCCTAAGGTCCCTACTCCTGAAGAACCCGGTTTTCACGCCGTCGACGACATTCAGAAATCTGCCTCTTCTGGGGAAAAACCTACGGAGACTAATGACACCAACACCAACGCCAACGTTGCTAGCCCCAGAGGGTGTGCAACTAGTGGATCATTTGGCCAAATGACAATTTTCTATTGTGGTAAGGTGAACGTCTATGATGGAGTCTCACCTGATAAGGCACGAGCAATCATGCAGCTTGCTGCAAGTCCTGTCCAGTTTACTCAGGATGATCCTTTACATGGAAATGCATCAGTTTGGTCTTCTCCTTGTCACTTACCGATGGATAAGGAGGTCCTCATCCCTGTTGATACAACAATCCTTCAGGTTGCTCAAGCAGGTAATAAGATGGTGGAATATCCTCTGCAATACAGAGAGAAAGGGAGCTTAAATCGTGATGCTGATATAGATGGTCAAGCAAGCAGAAAAATCTCATTGCAGCGATATCGTGAAAAGCGTAAGGACAGGGGAAGATTTAAAGGCAAGAAATTGACTGCAATAACTTCATCTAACTTCGAGATGTATATGAACCTTCCAGTGAAGGTCCATGCCTCAAATGGGAATTCAAGCCGTAGTAGCACTAGCTCTCCACCACAGCCTAGACTGCCTCTAGTTTCCAGTGGTTCAGCTGAAAACCATCTCAAAGTTGCCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1011 0.4817 MNAGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSDDDSPPHPPPMHHHPHAPQPQANLTQPPPKVPTPEEPGFHAVDDIQKSASSGEKPTETNDTNTNANVASPRGCATSGSFGQMTIFYCGKVNVYDGVSPDKARAIMQLAASPVQFTQDDPLHGNASVWSSPCHLPMDKEVLIPVDTTILQVAQAGNKMVEYPLQYREKGSLNRDADIDGQASRKISLQRYREKRKDRGRFKGKKLTAITSSNFEMYMNLPVKVHASNGNSSRSSTSSPPQPRLPLVSSGSAENHLKVALPIDLNDKDVQEC* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00906 336 Pfam tify domain 147 175 IPR010399 -
Phac7g00906 336 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 294 IPR040390 -
Phac7g00906 336 ProSiteProfiles Tify domain profile. 141 176 IPR010399 -
Phac7g00906 336 MobiDBLite consensus disorder prediction 289 312 - -
Phac7g00906 336 MobiDBLite consensus disorder prediction 64 139 - -
Phac7g00906 336 MobiDBLite consensus disorder prediction 289 316 - -
Phac7g00906 336 MobiDBLite consensus disorder prediction 115 139 - -
Phac7g00906 336 MobiDBLite consensus disorder prediction 77 101 - -
Phac7g00906 336 SMART tify_2 141 176 IPR010399 -
Phac7g00906 336 Pfam Jas motif 245 262 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00906 Phac-Chr7 5633705 5639720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00906 5 291 Tify Gene Family AT4G14720 46.205 4.99e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac7g00906 tify 3.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00906 - - gmx:100813937 506.908