Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00898 ATGGCTGGTAGGTTGCCTGGAGTTGGTTTGCTTGCAAGGAAGAGAACAGAGAGCCACCATAGACATGAAAATCGACACAACTATTACCTAAAGGAATCACTCCACCCACCTTGGATTCCCACTGTCTTAGATGAAACTGCCCTCAAGGCCAGGCAGAGGCTTCACCAGAAGCTTGGACACTTCTTTTCCTCATACAGGTCAGATGAGAATCCAAGAAAAAAAGGAGGAAAAGTGAGGGAAAGCAGTAACCAGAAGAAAGATGGAGGATTAGGTCGGAAGTTATTAGAGAGTTCATGGTTATTGCGTGGAAACAAGGTTAAGGAAGAGAGAAAAGTGTGTGCTGTTTGTCTTGAAGATTTGGGGGAAGAGCAACATGTTATGAACCTTTCATGCTCCCACAAGTATCATTCTGCATGTCTTCTTCCCTGGCTTGCAACCCATCCCCACTGTCCTTATTGTCGAACTCCAGTCCAACTCTGA 480 0.4542 MAGRLPGVGLLARKRTESHHRHENRHNYYLKESLHPPWIPTVLDETALKARQRLHQKLGHFFSSYRSDENPRKKGGKVRESSNQKKDGGLGRKLLESSWLLRGNKVKEERKVCAVCLEDLGEEQHVMNLSCSHKYHSACLLPWLATHPHCPYCRTPVQL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00898 159 CDD RING-H2_PA-TM-RING 112 154 - -
Phac7g00898 159 SMART ring_2 113 153 IPR001841 -
Phac7g00898 159 MobiDBLite consensus disorder prediction 66 90 - -
Phac7g00898 159 Pfam Ring finger domain 112 154 IPR001841 -
Phac7g00898 159 MobiDBLite consensus disorder prediction 64 90 - -
Phac7g00898 159 ProSiteProfiles Zinc finger RING-type profile. 113 154 IPR001841 -
Phac7g00898 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 158 IPR013083 -
Phac7g00898 159 SUPERFAMILY RING/U-box 112 157 - -
Phac7g00898 159 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 51 155 - -
Phac7g00898 159 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00898 70 154 C3H Transcription Factor Family AT3G58720 35.294 2.47e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00898 - - gmx:100527548 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00898 7 5533177 5534920 Phac7g00898 7 5533177 5534920 ECH