LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g00897	ATGGGGAAGACAGGCAAATGGCTTAGAAACTTGTTGACAGGTAAGAAAGACAAGGAAAAGGAGAAGGAAAAATCTACATCTAACCTGATTTCTTCTTCAAATGGAACAGAAAACTCAGCCACTCCAACTTCCACAACCCCAAAGGAGAAAAAGAGATGGAGTTTCAGAAGATCATCAGCCACTTCCACAGCCACACCAATAGCAACTTCCAAGGAATTGAATTTTGTAGAACCAAATGCCACTGCTTCACAGACAGTGCAAGCTGACAATGATAATCAGAATGAGCAAAGGAAGCATACCATGGCTGTGGCTGCTGCCACTGCAGCAGCAGCTGATGCTGCGGTGGCAGCTGCTCAGGCTGTAGCTGTTGTGATCCGTTTGACTTCTGCTTCCAATGCAACATCTAAAAGCTTTGAAGAGGCTGCTGCCATTAAAATCCAATCAGTCTTTCGGTCTCACTTGGCAAGGAAAGCATTGTGCGCTCTAAGAGGACTAGTGAAGTTGCAGGCACTGGTAAGGGGTCACTTGGTGAGAAAACAAGCCAAAGCAACACTGAGATGCATGCAGGCTTTGGTGACGGCACAAGCTAGAGCTCGTATTCAGAGGATCCGAATGGGTTCAGAAGGAATTCCTAATCAACAACAAAGAAAAGCCACACATGATGATTTGTTCAGGCATATATATAATGAAATGGAGAGAGGCTTGGAAGACAACATCAAGATTGTTGAGATGGATGTTGGTGAAAATAAAAATAACTCCAGAAGCAGCAGTGTGTATCATCATGAGCATCAAGAACAACATGATCACAGATTTTCCACACATTATTCAACAAATGGTTCCTACTCGAAGGAAGAAAACTACAAGGTCTCACCAGCTCCATCAGCATTGACAGAGTTGAGCCCAAGAGAATGCAGTGGCCATTTTGAGGACTGTTTCAGCACAGCCCAAAGCAGCCCTCAGTTCCACTCTGCTGTGTCAAGAACAGAAAATTCAAAGCACCCTTTTTCTTTCCCTAGGCCAGCTTATGCAGAATCTATCTGCTATGACTACCCTCTGTTTCCAAATTACATGGCCAACACTGAATCATCAAGGGCCAAAGTCAGATCACATAGTGCACCGAAACAAAGACCAGATTCATTTGAGAAGCAACCAAGCCGGCGAAGAGCTTCAGTTGAGGGAAGAAATGTCCCAAGGCCAATGAGGATGCAAAGATCATCTTCACATGTGGGTGTTACTGCTCAAAACTATCAATATCCTTGGTCAATCAAGCTTGATAGATCCGCAGTTTCACTCAAAGGCAGCGAGTGTGGCTCTACAAGTACAGTACTCACTACCACTAATTATTGCAGATCTCTTGTTGCATTTGACCCACGTGGAGATAGTTACTGA	1389	0.4428	MGKTGKWLRNLLTGKKDKEKEKEKSTSNLISSSNGTENSATPTSTTPKEKKRWSFRRSSATSTATPIATSKELNFVEPNATASQTVQADNDNQNEQRKHTMAVAAATAAAADAAVAAAQAVAVVIRLTSASNATSKSFEEAAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARIQRIRMGSEGIPNQQQRKATHDDLFRHIYNEMERGLEDNIKIVEMDVGENKNNSRSSSVYHHEHQEQHDHRFSTHYSTNGSYSKEENYKVSPAPSALTELSPRECSGHFEDCFSTAQSSPQFHSAVSRTENSKHPFSFPRPAYAESICYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFEKQPSRRRASVEGRNVPRPMRMQRSSSHVGVTAQNYQYPWSIKLDRSAVSLKGSECGSTSTVLTTTNYCRSLVAFDPRGDSY*	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	364	408	-	-
	Phac7g00897	462	ProSiteProfiles	IQ motif profile.	139	167	IPR000048	GO:0005515
	Phac7g00897	462	PANTHER	IQ-DOMAIN 5-RELATED	1	392	-	-
	Phac7g00897	462	Pfam	Protein of unknown function (DUF4005)	319	394	IPR025064	-
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	57	71	-	-
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	255	272	-	-
	Phac7g00897	462	Pfam	IQ calmodulin-binding motif	166	182	IPR000048	GO:0005515
	Phac7g00897	462	Pfam	IQ calmodulin-binding motif	141	159	IPR000048	GO:0005515
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	250	286	-	-
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	1	71	-	-
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	76	91	-	-
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	10	26	-	-
	Phac7g00897	462	Gene3D	-	137	192	-	-
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	27	48	-	-
	Phac7g00897	462	ProSiteProfiles	IQ motif profile.	163	190	IPR000048	GO:0005515
	Phac7g00897	462	SMART	iq_5	138	160	IPR000048	GO:0005515
	Phac7g00897	462	SMART	iq_5	161	182	IPR000048	GO:0005515
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	367	394	-	-
	Phac7g00897	462	MobiDBLite	consensus disorder prediction	76	95	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g00897	Phac-Chr7	5519504	5522135	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g00897	1	450	IQD Protein Family	AT4G14750	46.934	4.30e-103	313

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g00897	-		-	gmx:100817667	716.457