Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00891 ATGGACACGCCAGATAGGAGCAAGATCAACACCCCTCTTTCTCAGTTTGAGGATTCACCTGTATTTAACTATATCAGTAATCTATCTCCTATAGAGCCCGTTAAGTCTGTTCACATTACTCAAACCTTCAATTCGCTCAGCTTTTCATCCCCTCCGTCTGTTTTCACATCACCCCATGTCAACTGTCACAGGGAATCCAGATTCCTCAGGAGGCATAACCTCTTGGACGCATCCAAACCTAAGGGTTCATCTGAAGATATAAATAATGTTTATTCATGTGAAAAGACTCCAGCAGATTCATCTCAGCCATGTCATGAATCAAGTGAGCCGCAGGAAAATACCAATCCAAATATTTCCATAAGAGATGCCTCAAACGAGCTATGTAATGAAAACCGAAATATCTCAATTGAGGTCCCACAAGGCCTAAAATATAATTTGGCTAGCCCAGGGTATGATCCTGTGATCTCTGCTGATGAGGCTGACTCTCTTTTGGAACTGCCGGGCAAGCCAGGATCAGATGTTGCCTATGTTCCAGATGACTCTGAAAAGAATTCAATTGAGGGTGAAATGCATCCTCCAGGTTTAAGTCAAAATGAGGAAAAAATTGAAGGCTCGGATTGTGGTGTGGATGATTTAATTACTGAAGCCTCTGATCTGTTAATGTTTAGTCCCCCAAATTTGACAGAAGCTTTTAAGGATATAAACAAACAATTAAATCCTTCTACAAAGCTTACCAATTTTAGGACTTTGTTACAACAATCTGCCACCAATGATGGTCAACAAATGCACATTGTTGATGCAGTTGCTTCTGGTTCAGAACATGAAATTGAAAATCATCCTTGTGAATCTGGAGCAGCCACAGACACAGTTCAGAGACAGGACAATCATAGCAATGTTGCTTTGGTGGCTAGCAATCCAACTGAGAAAATGGATGATAAGCTTCTTTATGTGACACACCGTGGTATACGGAGACGCTGTCTAGATTTTGAGATGGCCAGTGTGCAAAGGAAGAACCTAGATGGTAAATCACACACCAATTCTAGTACAGAAAAGTCTGATGAGATGGATGTTAGTAAAGGAAAGCAAGTGCTCCCTATAAAACATAGTGGGGATTCACGGAAGTGTGTTTTGCCTGGAATTGGTTTGCACTTGAATGCACTTGCAACCTTAAATGATTGCAAAAACATAAAAATTGAGAAGTTGCTAGCTGGAAGGCAACCTAACATGCCCAGCTCCTCTTCATCCGTGCAACTTTCTGCAAGCCAAGAACATCAACTAGCATTGGTGCCTGCATCAGTGGAAAAAGATTTGGAGCCATCAGAGAATGAAGTTCAGCCTGGTGAAGATTGTACCCAGCCTTTGCTTCTCATGGCTGGTGAAGATTTCCAGCAGAATAGTCCAAAAAGGAAAAGGCGCAGGTTAGAACCAGATGGGGAAGGGGAGTCTTGCAAGCGTTGTAATTGTAAGAAATCAAAGTGTTTAAAGCTTTATTGTGAGTGCTTTGCTGCGGGAGTCTACTGCATAGAGCCATGTTCATGTCGTGATTGCTTCAACAAGCCTATTCATGTTGATACCGTTCTTCAAACTCGCCAGCAGATTGAGTCTCGAAATCCACTTGCTTTTGCTCCTAAAGTCATACGGAGTTCTGATTCTGTACCTGAAATTGGGGATGACCCTAACAAAACTCCAGCTTCAGCCCGACACAAAAGAGGATGTAATTGCAAGAAATCAAGCTGCTTAAAGAAATACTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATAAGCTGCAGATGTGAAGGATGCAAGAACACATATGGTAGAAAGGATGGTTCTGTTCCTTCTGGAATAGAAGCCAAGCCCGAAGAAGAAACAGAAGCATGTGAAAAGGGTGTGATGGAAAATGCTTCACATAAAACTGAAACACAGAATATTGAAAACCATCCAGACCATGCTCTTCCTACAACACCATTACGTCTTTCCAGATCATTGCTCCCATTACCCTTTTCATCAAAGGGCAAGCCACCGAGATCTTTTGTTACTACAATCTCCAGTTCTGGATTGTTTGTGAGCCAAAAGCTCGGGAAATCAAGTGCTCCGCGGTCTCAACCTAAATTTGACAAGCCTTTGCAAACTGTTCCGGATGATGACTCTCCTGTCACCTGCATCAAAACTTCTTCTCCAAATGGCAAGAGGATCTCCTCTCCTAATTGTGACGTGGGATCATCTCCTACTCGCAGAGGTGGGAGGAAGTTGATTTTACAATCTATCCCTTCCTTTCCTTCTCTCACCCCTCACAATCTTCGGAGTGACTGA 2316 0.4266 MDTPDRSKINTPLSQFEDSPVFNYISNLSPIEPVKSVHITQTFNSLSFSSPPSVFTSPHVNCHRESRFLRRHNLLDASKPKGSSEDINNVYSCEKTPADSSQPCHESSEPQENTNPNISIRDASNELCNENRNISIEVPQGLKYNLASPGYDPVISADEADSLLELPGKPGSDVAYVPDDSEKNSIEGEMHPPGLSQNEEKIEGSDCGVDDLITEASDLLMFSPPNLTEAFKDINKQLNPSTKLTNFRTLLQQSATNDGQQMHIVDAVASGSEHEIENHPCESGAATDTVQRQDNHSNVALVASNPTEKMDDKLLYVTHRGIRRRCLDFEMASVQRKNLDGKSHTNSSTEKSDEMDVSKGKQVLPIKHSGDSRKCVLPGIGLHLNALATLNDCKNIKIEKLLAGRQPNMPSSSSSVQLSASQEHQLALVPASVEKDLEPSENEVQPGEDCTQPLLLMAGEDFQQNSPKRKRRRLEPDGEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCRDCFNKPIHVDTVLQTRQQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNTYGRKDGSVPSGIEAKPEEETEACEKGVMENASHKTETQNIENHPDHALPTTPLRLSRSLLPLPFSSKGKPPRSFVTTISSSGLFVSQKLGKSSAPRSQPKFDKPLQTVPDDDSPVTCIKTSSPNGKRISSPNCDVGSSPTRRGGRKLILQSIPSFPSLTPHNLRSD* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00891 771 MobiDBLite consensus disorder prediction 461 482 - -
Phac7g00891 771 MobiDBLite consensus disorder prediction 464 482 - -
Phac7g00891 771 SMART CXC_2 567 608 IPR033467 -
Phac7g00891 771 SMART CXC_2 481 522 IPR033467 -
Phac7g00891 771 MobiDBLite consensus disorder prediction 338 361 - -
Phac7g00891 771 MobiDBLite consensus disorder prediction 718 742 - -
Phac7g00891 771 MobiDBLite consensus disorder prediction 757 771 - -
Phac7g00891 771 MobiDBLite consensus disorder prediction 694 771 - -
Phac7g00891 771 MobiDBLite consensus disorder prediction 73 119 - -
Phac7g00891 771 MobiDBLite consensus disorder prediction 82 119 - -
Phac7g00891 771 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 570 605 IPR005172 -
Phac7g00891 771 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 484 519 IPR005172 -
Phac7g00891 771 ProSiteProfiles CRC domain profile. 482 607 IPR005172 -
Phac7g00891 771 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 766 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00891 Phac-Chr7 5472586 5478413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00891 11 766 CPP Transcription Factor Family AT3G22780 42.018 5.08e-154 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Phac7g00891 TCR 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00891 - - var:108326442 1386.7