Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00867 ATGAAGCAGGTAGTAGGAATGGTAGTTTCCAATAAGATGCAGAAATCTGTTGTTGTGGCAGTGGATAGACTATTCTACCACAAGGTGTACGATCGTTATGTCAAGCGCACCTCCAAATTCATGGCTCATGATGAGCACAACCGCTGTAACATTGGTGACAAAGTTCGACTGGATCCTTCTAGGCCATTGAGCAAGCATAAAAATTGGGTTGTTGCTGAAATTCTTAAGAAGGCACGGATATATGTTCCGCCCTCCCCCAATAATGTCAGCTCCAGCTCTGAAGTACCTGCTTCATAA 297 0.4411 MKQVVGMVVSNKMQKSVVVAVDRLFYHKVYDRYVKRTSKFMAHDEHNRCNIGDKVRLDPSRPLSKHKNWVVAEILKKARIYVPPSPNNVSSSSEVPAS* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00867 98 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac7g00867 98 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac7g00867 98 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac7g00867 98 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac7g00867 98 SUPERFAMILY Nucleic acid-binding proteins 2 88 IPR012340 -
Phac7g00867 98 Gene3D - 1 94 IPR012340 -
Phac7g00867 98 FunFam 30S ribosomal protein S17 1 98 - -
Phac7g00867 98 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 1 83 IPR000266 GO:0003735|GO:0005840|GO:0006412
Phac7g00867 98 NCBIfam 30S ribosomal protein S17 2 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
Phac7g00867 98 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00867 6 75 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 38.028 1.85e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00867 K02961 - gmx:100794499 158.688