Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00788 ATGCAAGACTTTTTGGGTTCTCTTCGCCGGTCCCTTGTTTTCCGAGCCGGCGGCGACGATGCTCCTTTTGCCGGAATCGCCGACAAGCTTGGCTCTGCCATTCGCAAATCGCGAATAGCATTGAAACCTCCTCCTCCTCCCATCCGGTGGCGCAAGGGCGAGTTGATTGGTTCCGGCGCCTTCGGTCACGTCTACATGGGAATGAACCTCGATTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATCGCGCCTGGTAGCGCTTACAAGGAGAATACACAGGCTAATATTCGGGAGCTCGAAGAAGAAGTCAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACTGCGAGAGAGGAGAATTCCTTAAATATTCTGCTGGAGTTCGTACCTGGTGGTTCTATCTCATCACTTTTGGGGAAATTTGGATCCTTCCCTGAATCCGTTATAAGAATGTATACGAAACAGCTTTTATTGGGCCTTGAATACCTTCACAATAATGGGATTATTCACAGAGATATAAAGGGAGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTTGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACTATCAATGGTGCAAAATCAATGAAGGGCACACCACACTGGATGTCCCCTGAAGTTATTTTACAAACAGGACATACAATCTCCACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACTGGAAAGCCTCCATGGAGTCAACAATATCCCCAAGAGGTTTCAGCTCTTTTCTATATTGGGACAACTAAATCTCATCCACCCATACCGGAACATCTGTCTCCTGAGGCAAACGACTTTTTGCTGAAATGTTTCCACAAGGAGCCAGATTTAAGGCCTTCTGCATCAGAGTTGTTACAGCATCCGTTCATCACCTGTGACTATCATGGATCTCATTCAGTCTTACGCAGTTCAATCAGGGATTCTTGCAATAAGATGGCAACATATGGAATGAACTCTAGAACCTCCTTCTTGGATTCTGTCCAGGGATCAACTTGCACTGGCTTGAAGGATGTTTGTCAGATAGATAGCATAAAGTTCTCAACTGTATATCATAAAGCAGATTCCTACCAGAGAGCAGACAACAATGATGATGACATGTGTGTGATGGATGAAGATGATTTTTTGATTGGTTCACCAGTAAAATCTGAATCTCTATTAGCTTCTGATGATACCAAGAGTTGCAATCCTTTGAGCAAACCTGCGGATGACCATCCTTGCAATTTTAATGAAACCCAATATTCAGAGAAAAACAGACCGAACTTGTCATTGTCAAGTGAGCCTCCAGGAACTGAAGATGATGAAGAAGTCACTGAATGTAAAATTAGAGACTTCCTTGATGCTAAGGCCCTTGAACTGAAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTTAACATATCAAATGCAGCCATTGCTCCTACTCCCTTTTCAAAGAGGAAAGTTATTTCGGGTGTCCCAAATGTAACATCAAAAGTCAGATCGCCTAGTCAGGCTTGGAGACGATTCTCAATGGTTGGCAGTGCTACTGTAGCAAGCCCTGGGAGTCATACCAAATACCGATCGAAGCATAGTGGTGCTCACTGTCAACCTTTGCAAGAAATTCAGCCACCTGAGCTGAATGAATCAAAGGAGACTCTTCATGATGCTCAGCTAGAATCATCTAGTGTAAGCTCAAACTTCTCTGAGAGGCAAAGGAAATGGAAAGAAGAATTGGTTGAAGAGCTCGAGAGGAAGCGAGAGATTATGCGTCGGGCCGGAACTGGAGGAAAGATTACATCTCCAAAGGATCACAAATTTTATGAAGACTGA 1878 0.4366 MQDFLGSLRRSLVFRAGGDDAPFAGIADKLGSAIRKSRIALKPPPPPIRWRKGELIGSGAFGHVYMGMNLDSGELIAIKQVLIAPGSAYKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREENSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSALFYIGTTKSHPPIPEHLSPEANDFLLKCFHKEPDLRPSASELLQHPFITCDYHGSHSVLRSSIRDSCNKMATYGMNSRTSFLDSVQGSTCTGLKDVCQIDSIKFSTVYHKADSYQRADNNDDDMCVMDEDDFLIGSPVKSESLLASDDTKSCNPLSKPADDHPCNFNETQYSEKNRPNLSLSSEPPGTEDDEEVTECKIRDFLDAKALELKKLQTPLYEEFFNISNAAIAPTPFSKRKVISGVPNVTSKVRSPSQAWRRFSMVGSATVASPGSHTKYRSKHSGAHCQPLQEIQPPELNESKETLHDAQLESSSVSSNFSERQRKWKEELVEELERKREIMRRAGTGGKITSPKDHKFYED* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00788 625 MobiDBLite consensus disorder prediction 565 589 - -
Phac7g00788 625 Pfam Protein kinase domain 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00788 625 Coils Coil 90 110 - -
Phac7g00788 625 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Phac7g00788 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Phac7g00788 625 ProSiteProfiles Protein kinase domain profile. 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00788 625 MobiDBLite consensus disorder prediction 603 625 - -
Phac7g00788 625 SUPERFAMILY Protein kinase-like (PK-like) 49 314 IPR011009 -
Phac7g00788 625 SMART serkin_6 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00788 625 MobiDBLite consensus disorder prediction 411 459 - -
Phac7g00788 625 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 322 - -
Phac7g00788 625 MobiDBLite consensus disorder prediction 428 450 - -
Phac7g00788 625 Coils Coil 588 608 - -
Phac7g00788 625 FunFam Mitogen-activated protein kinase kinase kinase 2 49 341 - -
Phac7g00788 625 Gene3D Transferase(Phosphotransferase) domain 1 49 345 - -
Phac7g00788 625 FunFam Serine/threonine-protein kinase STE11 47 140 - -
Phac7g00788 625 CDD STKc_MAPKKK 49 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00788 Phac-Chr7 4607396 4619931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00788 1 613 MAP Kinase Kinase Kinase AT3G06030 55.183 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac7g00788 Pkinase 3.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00788 - K20606 gmx:100795863 1065.45