Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00785 ATGTTCTCCCAAAATCTGATTCTCCCTCCCGAAAACCCTAGACCAGCGGCTTCGTTCGCTTCAAAACCCATGAGCAATGAGATCGCAATCGCTGCGCAGAAACCTCCTCCGTCGATTCTCGTTGGGCGCTTCAAGGCACTCCTCAAGCAGCGTGATGACGAACTTAGACTTGTCGCAGGGGTCCCCGTTCCGCCCCCGGCCACCGAAGAAATCGTCCAGATTTACGACCTCCTCTTGTCGGAACTCACCTGTAATTTGAAGCCTATCATCACCGATCTCACAATCATAGCCGAACAGCAGAGGGAGCACGCCAAAGGCATCGCTGACGCAATTTGCGCTCGGATTCTCGAGGTGCCAGCAGATCAAAAGCTTCCCTCACTCTATTTGTTGGACAGTATTGTGAAGAATTTTGGGCAGGAATACATTAAATACTTCTCTTTACGTCTGCCAGAAGTTTTTTGTGAGGCATACAGGCAGGTTCAGCCTAGTTTGCATCCTGCTATGCGGCATCTTTTTGGGACCTGGTCAAAAGTTTTCCCACCTTCTGTCCTACGCAAGATTGAAGTTGAATTGCAATTTTCTCTAGCAGTTAACACCCAATCATCCACCCTGAATTCTGCAAGGGCTTCTGAATCTCCTCGGCCTAGTCATGGCATACATGTTAATCCGAAATACCTGCGCCAGTTGGAGCACTCAACTGTGGATAGTGTTGGTGCTGAAAAGTTGGATTCATCAGGAAATGCCAATAATGCAAACTTTGGCATTGTAGCTAGTAAGACACACCAAATTTTATCAGGCAGTAGCAGGCTGGGAATACCCTCTTCCCCTTCAAGAAGTGGACTTGATAGGCCTTTGTCTGGACCCATGGATGAGTATGCAGCTGACAGTTCTGCTAACAGATTAATTGAGAGAGACTCTCCTCATCCTTCTGTTGATTATGGAGTAGGCAAGGTATTAGGTAGAGATATGGAGTTGAGTGAATGGCAGCGAAAGCAGTATGCTGGTGATGGTCGTAATCGATTTCCGACTTCTATCACGTACAGCCTTAGTAATGGACATCAGCGTCAAAGTCCAAGAGCTTTAATCGATGCTTATGGCAGTGACAAAAGTCAAGAAACTTCTAGTAGTAAGCCTTTGCTAGTTGAACGGCTTGATAGAAATGGTGTAGACAACAAGGTATTGCCTACATCATGGCAGAATACTGAAGAGGAGGAGTTTGATTGGGAAGATATGAGTCCGACCTTAACAGATCATAGTAGGAATAACAGTATATTGCCTTCAACTATTGGATTTACCAGGGAAAGGCCTGTTGTTGCAGGTAATGCAGCTTTGTCAGAGCATGATTCCAGGAAGGGGGTTTGGTCTAGTGGATCTCAGCTTCCTCCAGTGGATGATTCTTCTGCTGCAGCAGATGATGCATTTGCTTCTTTGGGTTTCCGGCGAGCACCACTGGGACAGGTACCTGGATTCCAAAATCATGTCAGTCTGGGCTCTTCTCATCATCTGTCCAACTCGTCACAACATATCTTTAGTAATAGGGGACGAGCAAGAACTATTTCATTTCCTCCTATTGATAACATTCACAATGCAGATACAAATCCATATCGGGTTCGACCTGCAGTGTCAAGGATGGTTTCTGGCCGTGTTGCTAATGTAGAACCTAGACCATCAGTTTTGCCTACAACTCTGGAAATAAGGCCTTCTGTAAATTTGAATGTCAGTCGACCACCTGCATTAAATCCAATAACTCCATTGCAAAAACATGTTAGGAGTCAGTTTGAAGCTATACATACTAGTAACCCTATTGTGAATCATGTAAATAAATCTTCATTTATGCCAGAGCAGTCATTTGACAGTGTTGAGAACAAGGATACAAGTATTTTGAAGATACATCAGTTGCCTAATCAGCTTCCTGGACTAATTTCGTCCAACCAGCAAAATCACAGGCAAGCACCACAACTGCAGTTTTTCCCACCATCTCAGGATTCGTCAAACTCACAATTTAGTCATGGGAGTTCTTTGCAGGGACATGGTGCTTCTATAAGTACTGCCATGTCGAATCCGTTACCTGTTATGCAATTTCATTTGCCACTCCAAAGTATTGCAAATCATCCTTTGCATTTACGGGGTGGAGCCCGCCCACCTTTACCTCCAGGTCGCCCTCCTGTTCCATCTCAAATGATACCTCATCCAAATGCTAGTCCATTTATGTCAAGCCAACAGCCAACTGTTGGATATACTAATTTAATTAGTTCTCTTATGTCTCAAGGTGTGATCTCATTGGCTAACCAGCTACCTGCACAGGATTCTGTTGGAACTGAGTTTAATCCAGATATTCTGAAGATTCGTTATGAGTCTGCTATCAATGCCTTGTATGGTGATCTCCCAAGACAATGCACAACTTGTGGACTCCGATTCAGATGCCAAGAGGAACACAGTAGTCATATGGATTGGCATGTGACTAAGAATCGGATGTCTAAAAGCCGGAAGCAGAAACCCTCTCGGAAGTGGTTTGTGAGTGACAGGATGTGGCTTAGTGGTGCAGAGGCATTGGGAACTGAGTCAGTTCCAGGTTTTTTGCCTGCAGAAACCATAGAAGAAAAGAGAGACGATGAAGAGTTGGCTGTTCCAGCAGAAGAGGACCAGAATACTTGTGCATTATGTGGAGAGCCTTTCGATGAGTTTTACAGTGATGAAATGGAGGAATGGATGTATAGAGGAGCTGTATACCTCTATGCTCCCACGGGGACAACAGCAGGCATGGACAGGTCACAGTTAGGCCCTATAATCCATGCTAAATGCAGATCAGAATCTAATATGGCACCATCTGAAGATCTTGGGCTGGATGAAAAGGGTGCTGATGAAGACGGTACTCAAAGGAAGCGAAGGCGGAGTTGA 2898 0.451 MFSQNLILPPENPRPAASFASKPMSNEIAIAAQKPPPSILVGRFKALLKQRDDELRLVAGVPVPPPATEEIVQIYDLLLSELTCNLKPIITDLTIIAEQQREHAKGIADAICARILEVPADQKLPSLYLLDSIVKNFGQEYIKYFSLRLPEVFCEAYRQVQPSLHPAMRHLFGTWSKVFPPSVLRKIEVELQFSLAVNTQSSTLNSARASESPRPSHGIHVNPKYLRQLEHSTVDSVGAEKLDSSGNANNANFGIVASKTHQILSGSSRLGIPSSPSRSGLDRPLSGPMDEYAADSSANRLIERDSPHPSVDYGVGKVLGRDMELSEWQRKQYAGDGRNRFPTSITYSLSNGHQRQSPRALIDAYGSDKSQETSSSKPLLVERLDRNGVDNKVLPTSWQNTEEEEFDWEDMSPTLTDHSRNNSILPSTIGFTRERPVVAGNAALSEHDSRKGVWSSGSQLPPVDDSSAAADDAFASLGFRRAPLGQVPGFQNHVSLGSSHHLSNSSQHIFSNRGRARTISFPPIDNIHNADTNPYRVRPAVSRMVSGRVANVEPRPSVLPTTLEIRPSVNLNVSRPPALNPITPLQKHVRSQFEAIHTSNPIVNHVNKSSFMPEQSFDSVENKDTSILKIHQLPNQLPGLISSNQQNHRQAPQLQFFPPSQDSSNSQFSHGSSLQGHGASISTAMSNPLPVMQFHLPLQSIANHPLHLRGGARPPLPPGRPPVPSQMIPHPNASPFMSSQQPTVGYTNLISSLMSQGVISLANQLPAQDSVGTEFNPDILKIRYESAINALYGDLPRQCTTCGLRFRCQEEHSSHMDWHVTKNRMSKSRKQKPSRKWFVSDRMWLSGAEALGTESVPGFLPAETIEEKRDDEELAVPAEEDQNTCALCGEPFDEFYSDEMEEWMYRGAVYLYAPTGTTAGMDRSQLGPIIHAKCRSESNMAPSEDLGLDEKGADEDGTQRKRRRS* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00785 965 MobiDBLite consensus disorder prediction 266 292 - -
Phac7g00785 965 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 62 953 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Phac7g00785 965 FunFam polyadenylation and cleavage factor homolog 4 64 192 - -
Phac7g00785 965 Pfam CID domain 86 186 IPR006569 -
Phac7g00785 965 MobiDBLite consensus disorder prediction 935 965 - -
Phac7g00785 965 MobiDBLite consensus disorder prediction 655 681 - -
Phac7g00785 965 MobiDBLite consensus disorder prediction 339 357 - -
Phac7g00785 965 SUPERFAMILY ENTH/VHS domain 67 192 IPR008942 -
Phac7g00785 965 MobiDBLite consensus disorder prediction 266 281 - -
Phac7g00785 965 Gene3D - 65 192 IPR008942 -
Phac7g00785 965 CDD CID_Pcf11 75 192 IPR047415 -
Phac7g00785 965 ProSitePatterns Zinc finger C2H2 type domain signature. 799 819 IPR013087 -
Phac7g00785 965 SMART 558neu5 70 192 IPR006569 -
Phac7g00785 965 ProSiteProfiles CID domain profile. 67 195 IPR006569 -
Phac7g00785 965 MobiDBLite consensus disorder prediction 402 421 - -
Phac7g00785 965 MobiDBLite consensus disorder prediction 335 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00785 Phac-Chr7 4578763 4585648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00785 697 965 C2H2 Transcription Factor Family AT4G04885 58.451 2.05e-100 331