Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00784 ATGGAAGAATATACAGTTCACAATTGTGGTGGCTGGTTAATTGAGAGAAACTCTCTTCATCACGTAGTTGACTATGGAGTAGGTAGAACTGTGGAAATGAGTGGAAGGTGTCGAATGCAGTATTCTGGGTGTAATCATTTTCCAACTTCTATCACTCACAGCCCTAGTAATGAATATCATCCTGAAAGTCCAAGAGCTTTAATTCATGCATATGGCAATGAGAAAAGCCAAGAATGTCCAAGCAGTAAAGCACTGTTAGTTGAACAGATGGATATAAACTGCATAGGCAATAAGGTGTGGTCACAATCATGGTTGACTACTGAAGAGAAGGAGTTTGACTGGGAAGATATGAAGTCAACCCTAATAGACCATGGTAGGAATAAAAGTTTATTACCTTCAACTGTTGGTTTCTCAGGGGAAAGACCTGTTCTTGCAGATAATGCAACTTTGTCAGAGCAAAATGCCTGGAAGTATCGGTCTAGTGGATCTCAGCTTCCTCCTCCTCTTGATGATTCCTCTGCTATGGAGATGAAGCATAGCCTGGTCTCCTCTCAATCTCATTGTGCTAGGAAGACTTCTCATCATCCCTATAACTCGTCACAACATATCTTTAGTGGTAGGGATCAAGCAAGGACTCTTACGAAACCTTCAATTAATCACATTCGCAGAAGCTATTTCAACCCATATGGCGTTCGACATGCAGTGCCAAAAATGGTTTCTGATATTGCCTCTAATGTGAAACCTCCACCATCAGTTGTGCTAGCATCTTCTGAAACAACACCTTCTGCAAATCAGAATGTCACTCGATCTCCTATCTTAAATCCAATACTTCCTGGACAAATTTCTTCCAACCAGAAAAATCACTGGAAAGCACCACAGCCACAGTTTTTTCCATCTCAGGATCCATCAACCTCACAGTTTACTCAAGGGATGAGTTCGGGACAAGGTGAATCTACATGTACAACCATGTTGAATCCGTTACCTGTGAAATTCCCTTCATCACTCCCAACTGCAAACTACCCTTTTCATCCAAGTCATCCTACTGCTTCATCTCAAATGATGAAACCTCATTCAAATGTTGGTCCAGTTATGTCAAGCCAACAGGCCGATTTACTTACTTCTCAAATTTCTCATGTCATCTCACGGGATAAACTTCTGCCAACACAGAAATGTATTGGAACAGAGTTTAATGCAGTCAATCTGAAGGTTCGGTATGAGTCTGTACTGAATGCCTTGTATGGTGATCTCCCAAGACAATGCAGTACTTGTGGGCTCCGATTCAGAAGCCAAGAGGAACACAGAAGTCATATGGATTGGCATATGACTAAGAATCGGGCGCTTAAAACGAGGAAGCAGAGATCATGTCGCCAATTGTTTGTGAGTGAAAGGATGTGGCTTAGTGGTGCAGAGGCATTGGGAACAAAGTCAGTTCCATCTTTTTTCCCAACAGAAACAAAAGAAGAAAAGAAAGATGATGAAGAGTTGGCAGTGTCAGCAGATGAGGACCAGAAAAGATGTGCTCTATGTAAAGAGCCTTTTGATGAGTTTTACAGTGATGAAATGGATGACTGGATGTATAGAGGAGCTGCATACCTCTATCAACCCACAGGAACATTATCAGCCATGGACAGGTCACAGTTAGGTCCCATAATTCATACCAAATGCAGATCAGAATCTAAAATGCCTCCCTCCCAACATCTTCGAAAGCATGATTATGAAGAGGGTACCCCAAGGAAACGAATGCGGATTTGA 1752 0.4195 MEEYTVHNCGGWLIERNSLHHVVDYGVGRTVEMSGRCRMQYSGCNHFPTSITHSPSNEYHPESPRALIHAYGNEKSQECPSSKALLVEQMDINCIGNKVWSQSWLTTEEKEFDWEDMKSTLIDHGRNKSLLPSTVGFSGERPVLADNATLSEQNAWKYRSSGSQLPPPLDDSSAMEMKHSLVSSQSHCARKTSHHPYNSSQHIFSGRDQARTLTKPSINHIRRSYFNPYGVRHAVPKMVSDIASNVKPPPSVVLASSETTPSANQNVTRSPILNPILPGQISSNQKNHWKAPQPQFFPSQDPSTSQFTQGMSSGQGESTCTTMLNPLPVKFPSSLPTANYPFHPSHPTASSQMMKPHSNVGPVMSSQQADLLTSQISHVISRDKLLPTQKCIGTEFNAVNLKVRYESVLNALYGDLPRQCSTCGLRFRSQEEHRSHMDWHMTKNRALKTRKQRSCRQLFVSERMWLSGAEALGTKSVPSFFPTETKEEKKDDEELAVSADEDQKRCALCKEPFDEFYSDEMDDWMYRGAAYLYQPTGTLSAMDRSQLGPIIHTKCRSESKMPPSQHLRKHDYEEGTPRKRMRI* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00784 583 MobiDBLite consensus disorder prediction 299 318 - -
Phac7g00784 583 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 40 565 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Phac7g00784 583 MobiDBLite consensus disorder prediction 556 583 - -
Phac7g00784 583 MobiDBLite consensus disorder prediction 559 583 - -
Phac7g00784 583 ProSitePatterns Zinc finger C2H2 type domain signature. 420 440 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00784 Phac-Chr7 4569201 4571350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00784 342 582 C2H2 Transcription Factor Family AT4G04885 51.867 6.18e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g00784 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00784 K14400 - gmx:100794796 572.778