LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g00767	ATGGCTTCATTGAACTTCTTCATTTTGCACCTAACCTTCTTTTCCCTCTTTCTTTCTTGCTCCCCTTCTCCTATCACCCAAGGTGCTTTGGACGGAGCTTCAAAAGCTTACTATAACTGCACAAGGAACAGCACTTTTGCTTCCTATAGCGTGGCTTACCGTTCTAACGTCAAAACACTCCTAGATTGGCTCTCCTCCAATGTCACTAACAATAACAGATTCTACAACACCACAGTAGTTAGCAGACACACAGCAGACACTGCCTATGGTAGCTTCCTTTGTACAACAGTCAACAACCCTGAAATCTGCCAACGATGCGTGAAAGAAGCTGCCAAACTTATATCATCGCTTTGCACCATTGCAAAAGAGGCTATCATATGGTACGAAGTGTGCTATGTGCGCTACTCTGATCGTCGTTTCTTCTCCACTGTGGAGGTGAGTCCTAAACTCTCCTTTATGAATGATCAGGACTACGTGGGTGACGTTGGGCTCTTCAACAATATTGTCTGGGATATGCTGATCGATTTGAGAAGTGAGGCAGCAAGTGCTTCTAATAAAAGCGCTGATAAGTCTGTGAACATCACGGATAACCAAAAGTCGTATGGCTATGCTTGGTGCCTACCATACCTCACCAAAGAGAACTGCAGTTGGTGTCTTAGCGAGGCCATAGCAGACATTCCAACCGGTTGCTGCAGAGGAAAATCTGGGGGAAAAGTAATATTTCCTAGTTGTGGTGTTAGATACGAATTATATCCATTCCATATGGCACATGTAAATAGTGGTTGGGTGTCTCCGCCACCACTTCCCGACAGTCCTCCCCCTTTTGCTTCACCAGGGAAAAGAAAGCAGAAGACACTAACAATAATTGTAACTGTTGTTCCAATTGTTGTTTCACTGGTGCTTTTATCCTTGGGCTGCAGTTGTTTTCTACGTAGGAAAGAAACAAAGAATCAGCATGACATTCTCAAAGAAAGCTTTGGGAATGACAGTACCACTTTGGAGTCCTTGCGATTTGAATTAGCCAAAATTGAAGCTGCTACAAATAGATTTGCTAAAGAAAACATGATAGGCAAAGGCGGATTTGGAGAAGTCTATAGGGGTATTCTTTCTGATGGACAAGAAATAGCTGTGAAGAGGCTTACCGGAAGCTCTCGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACATAGAAATTTAGTGAGATTACTAGGATTTTGCTTAGAAGATGATGAAAAGATACTCATTTACGAGTACGTGAAAAACAAGAGTCTTGATTATTTTTTATCAGATATCAAGAAGCGAACACTATTATCTTGGTCCGAACGACAAAAGATTATAAGAGGAATTGCACGAGGCATTTTATATCTACACGAAGATTCTTGTCTAAAAATAATACATCGTGATCTTAAACCTAGTAATGTTTTATTAGATAGTAATATGAATCCAAAGATTTCAGATTTTGGTATGACTAGAATTGTTGCTGGAGATGAAATTGAAGAAAGTACTGGAAGAATTGTAGGAACATATGGTTATATGCCTCCTGAGTATGCAATGCATGGACAATTTTCTGTGAAATCTGATGTATTTAGTTTTGGAGTTATGGTTCTAGAGATTATTAGTGGAAAGAGAAAATTTTGTTCATCTGAATCAGAGGTTATTGATGACATCCGAAGACATGTAAGTACAAAATTATTCCATTTCTAG	1725	0.3988	MASLNFFILHLTFFSLFLSCSPSPITQGALDGASKAYYNCTRNSTFASYSVAYRSNVKTLLDWLSSNVTNNNRFYNTTVVSRHTADTAYGSFLCTTVNNPEICQRCVKEAAKLISSLCTIAKEAIIWYEVCYVRYSDRRFFSTVEVSPKLSFMNDQDYVGDVGLFNNIVWDMLIDLRSEAASASNKSADKSVNITDNQKSYGYAWCLPYLTKENCSWCLSEAIADIPTGCCRGKSGGKVIFPSCGVRYELYPFHMAHVNSGWVSPPPLPDSPPPFASPGKRKQKTLTIIVTVVPIVVSLVLLSLGCSCFLRRKETKNQHDILKESFGNDSTTLESLRFELAKIEAATNRFAKENMIGKGGFGEVYRGILSDGQEIAVKRLTGSSRQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEDDEKILIYEYVKNKSLDYFLSDIKKRTLLSWSERQKIIRGIARGILYLHEDSCLKIIHRDLKPSNVLLDSNMNPKISDFGMTRIVAGDEIEESTGRIVGTYGYMPPEYAMHGQFSVKSDVFSFGVMVLEIISGKRKFCSSESEVIDDIRRHVSTKLFHF*	575

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g00767	574	SUPERFAMILY	Protein kinase-like (PK-like)	328	556	IPR011009	-
	Phac7g00767	574	SMART	serkin_6	350	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00767	574	Gene3D	Transferase(Phosphotransferase) domain 1	426	572	-	-
	Phac7g00767	574	CDD	STKc_IRAK	356	552	-	-
	Phac7g00767	574	ProSitePatterns	Protein kinases ATP-binding region signature.	356	378	IPR017441	GO:0005524
	Phac7g00767	574	ProSiteProfiles	Gnk2-homologous domain profile.	146	253	IPR002902	-
	Phac7g00767	574	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	119	552	-	-
	Phac7g00767	574	ProSiteProfiles	Gnk2-homologous domain profile.	34	140	IPR002902	-
	Phac7g00767	574	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	471	483	IPR008271	GO:0004672\|GO:0006468
	Phac7g00767	574	Gene3D	-	149	253	IPR038408	-
	Phac7g00767	574	Gene3D	-	33	140	IPR038408	-
	Phac7g00767	574	Pfam	Salt stress response/antifungal	164	251	IPR002902	-
	Phac7g00767	574	Pfam	Salt stress response/antifungal	40	137	IPR002902	-
	Phac7g00767	574	FunFam	Cysteine-rich RLK (RECEPTOR-like protein kinase) 23	311	425	-	-
	Phac7g00767	574	Pfam	Protein kinase domain	351	565	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00767	574	ProSiteProfiles	Protein kinase domain profile.	350	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00767	574	Gene3D	Phosphorylase Kinase; domain 1	310	425	-	-
	Phac7g00767	574	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase B120	426	517	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g00767	Phac-Chr7	4405935	4410784	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g00767	11	567	Receptor kinase-like Gene Family	AT4G05200	45.070	2.09e-156	462

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac7g00767		Pkinase	1e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g00767	-		-	gmx:100793219	892.493