LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g00766	ATGGCTTCATTGAACTTCTTCATTTTGCACCTAACCTTCTTTTCCCTCTTTCTTTCTTGCTCCCCTTCTCCTATCACCCAAGGTGCTTTGGACGGAGCTTCAAAAGCTTACTATAACTGCACAAGGAACAGCACTTTTGCTTCCTATAGCGTGGCTTACCGTTCTAACGTCAAAACACTCCTAGATTGGCTCTCCTCCAATGTCACTAACAATAACAGATTCTACAACACCACAGTAGTTAGCAGACACACAGCAGACACTGCCTATGGTAGCTTCCTTTGTACAACAGTCAACAACCCTGAAATCTGCCAACGATGCGTGAAAGAAGCTGCCAAACTTATATCATCGCTTTGCACCATTGCAAAAGAGGCTATCATATGGTACGAAGTGTGCTATGTGCGCTACTCTGATCGTCGTTTCTTCTCCACTGTGGAGGTGAGTCCTAAACTCTCCTTTATGAATGATCAGGACTACGTGGGTGACGTTGGGCTCTTCAACAATATTGTCTGGGATATGCTGATCGATTTGAGAAGTGAGGCAGCAAGTGCTTCTAATAAAAGCGCTGATAAGTCTGTGAACATCACGGATAACCAAAAGTCGTATGGCTATGCTTGGTGCCTACCATACCTCACCAAAGAGAACTGCAGTTGGTGTCTTAGCGAGGCCATAGCAGACATTCCAACCGGTTGCTGCAGAGGAAAATCTGGGGGAAAAGTAATATTTCCTAGTTGTGGTGTTAGATACGAATTATATCCATTCCATATGGCACATGTAAATAGTGGTTGGGTGTCTCCGCCACCACTTCCCGACAGTCCTCCCCCTTTTGCTTCACCAGGGAAAAGAAAGCAGAAGACACTAACAATAATTGTAACTGTTGTTCCAATTGTTGTTTCACTGGTGCTTTTATCCTTGGGCTGCAGTTGTTTTCTACGTAGGAAAGAAACAAAGAATCAGCATGACATTCTCAAAGAAAGCTTTGGGAATGACAGTACCACTTTGGAGTCCTTGCGATTTGAATTAGCCAAAATTGAAGCTGCTACAAATAGATTTGCTAAAGAAAACATGATAGGCAAAGGCGGATTTGGAGAAGTCTATAGGGGTATTCTTTCTGATGGACAAGAAATAGCTGTGAAGAGGCTTACCGGAAGCTCTCGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAGCTTCAACATAGAAATTTAGTGAGATTACTAGGATTTTGCTTAGAAGATGATGAAAAGATACTCATTTACGAGTACGTGAAAAACAAGAGTCTTGATTATTTTTTATCAGATATCAAGAAGCGAACACTATTATCTTGGTCCGAACGACAAAAGATTATAAGAGGAATTGCACGAGGCATTTTATATCTACACGAAGATTCTTGTCTAAAAATAATACATCGTGATCTTAAACCTAGTAATGTTTTATTAGATAGTAATATGAATCCAAAGATTTCAGATTTTGGTATGACTAGAATTGTTGCTGGAGATGAAATTGAAGAAAGTACTGGAAGAATTGTAGGAACATATGGTTATATGCCTCCTGAGTATGCAATGCATGGACAATTTTCTGTGAAATCTGATGTATTTAGTTTTGGAGTTATGGTTCTAGAGATTATTAGTGGAAAGAGAAAATTTTGTTCATCTGAATCAGAGGTTATTGATGACATCCGAAGACATGCTTGGACAAAATGGACAAAAGAAACACCACTAGAACTATTGGATCCTCATGTAGGAGGACCTTATTCTTGCGAAGAAGTCATCAAATATATACACATTGGTTTGTTGTGTGTTCAAGAAGATCCAAATGACAGACCTACAATGGCAACAATTGTGTTTTACCTCAACAACCATTCAATCAATTTGCCTTCCCCTCATGAACCAGGATATTTTAAGAGTAATAGAAAAGATAACATGGCTACCAATGAGGAATTGGATAATATCATTGATTCCATCAATGAAATTTCTCTAACTAAATTCTTTCCTCGATAA	2010	0.3935	MASLNFFILHLTFFSLFLSCSPSPITQGALDGASKAYYNCTRNSTFASYSVAYRSNVKTLLDWLSSNVTNNNRFYNTTVVSRHTADTAYGSFLCTTVNNPEICQRCVKEAAKLISSLCTIAKEAIIWYEVCYVRYSDRRFFSTVEVSPKLSFMNDQDYVGDVGLFNNIVWDMLIDLRSEAASASNKSADKSVNITDNQKSYGYAWCLPYLTKENCSWCLSEAIADIPTGCCRGKSGGKVIFPSCGVRYELYPFHMAHVNSGWVSPPPLPDSPPPFASPGKRKQKTLTIIVTVVPIVVSLVLLSLGCSCFLRRKETKNQHDILKESFGNDSTTLESLRFELAKIEAATNRFAKENMIGKGGFGEVYRGILSDGQEIAVKRLTGSSRQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEDDEKILIYEYVKNKSLDYFLSDIKKRTLLSWSERQKIIRGIARGILYLHEDSCLKIIHRDLKPSNVLLDSNMNPKISDFGMTRIVAGDEIEESTGRIVGTYGYMPPEYAMHGQFSVKSDVFSFGVMVLEIISGKRKFCSSESEVIDDIRRHAWTKWTKETPLELLDPHVGGPYSCEEVIKYIHIGLLCVQEDPNDRPTMATIVFYLNNHSINLPSPHEPGYFKSNRKDNMATNEELDNIIDSINEISLTKFFPR*	670

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g00766	669	Gene3D	Phosphorylase Kinase; domain 1	311	425	-	-
	Phac7g00766	669	CDD	STKc_IRAK	356	623	-	-
	Phac7g00766	669	ProSitePatterns	Protein kinases ATP-binding region signature.	356	378	IPR017441	GO:0005524
	Phac7g00766	669	ProSiteProfiles	Gnk2-homologous domain profile.	146	253	IPR002902	-
	Phac7g00766	669	Pfam	Protein kinase domain	351	618	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00766	669	Gene3D	Transferase(Phosphotransferase) domain 1	426	630	-	-
	Phac7g00766	669	FunFam	Cysteine-rich RLK (RECEPTOR-like protein kinase) 23	311	425	-	-
	Phac7g00766	669	Gene3D	-	149	253	IPR038408	-
	Phac7g00766	669	Gene3D	-	33	140	IPR038408	-
	Phac7g00766	669	SUPERFAMILY	Protein kinase-like (PK-like)	333	648	IPR011009	-
	Phac7g00766	669	ProSiteProfiles	Gnk2-homologous domain profile.	34	140	IPR002902	-
	Phac7g00766	669	FunFam	cysteine-rich receptor-like protein kinase 10	426	628	-	-
	Phac7g00766	669	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	471	483	IPR008271	GO:0004672\|GO:0006468
	Phac7g00766	669	ProSiteProfiles	Protein kinase domain profile.	350	627	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00766	669	Pfam	Salt stress response/antifungal	164	251	IPR002902	-
	Phac7g00766	669	Pfam	Salt stress response/antifungal	40	137	IPR002902	-
	Phac7g00766	669	SMART	serkin_6	350	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00766	669	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	35	649	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g00766	Phac-Chr7	4405935	4410784	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g00766	7	669	Receptor kinase-like Gene Family	AT4G05200	43.149	0.0	534

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac7g00766		Pkinase	1.5e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g00766	-		-	gmx:100793219	1058.13