LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g00755	ATGTCGTTACTCGTTTACGTTTTCTTTTTGGGTTTCTTCTTCAATTTTTCCATAACCGATGCCACTGAAATTTACTACCTCAATCACAGTTGCTCAAGCAACAAAACCTTCACTCCAAACAACGCTTACGAAACCAACCTGCGAACCCTCCTCACCTCCCTATCTTCCCATGCCACCACTGCACAATTCTTCAACACCACAACGGGTGGTGGAGACGGCAGCGAAATCATTTACGCCTCCTTCATGTGCCGCGGCGATGTCAGCAACCACACGTGCCAAGAGTGCGTTAGAACTGCAGCCGAACAAATATCCAGAGTGTGTCCCATCTCCAAAGAGGCCTTAATTTGGTACCACGAATGTTTGGTTCGTTATTCCAACCGCTGTTTTTTCTCCACCTTGGAGGAGTGGCCAAGGTTCAATTTCATGGATTACAACGTAACGAATTCAAGAAATGATAAAGGAAGCTATGGGTTCTGGTTGTTATCCAAAACGCTGAGTGATGCTGTGGGTGAGGCAGCGAACGCTGGTCCCGCAGGCACCATGAAATTTGCAACAAAAAACGCTACCGTGTTTGGGTCTCAGAAGATTCATACTCTTGTTCAGTGCACGCCAGATCTATCAAGCGAAGATTGCAGTAACTGTTTGGGTGATATTATGAGAGATATTCCTTTGTGTTGCCTTGGAAGGATAGGTGGAATGGTTCTATATCCCAGCTGCACTTTGATGTTTGGTACAAGACATTTCTACAGAGACGTTAATGCCATCCAACAATCAAAACCTTCTGGAATTAAAATGGGTTCACCAGGATCAATTATCACAGTTGTCATCCTTCTCGTTTTGACAATGCTGATCTCTTTTCACTGTTATTTCTTATGGAGAAGAGCAAGAAAGCGCAAGTATAAGATTCTTCTAAAAGAAAACTTTGGTCAAGAAAGTGTGACTTTAGAAGGGTTACAATTTGATTTAGCTATAATTGAAGCAGCAACAAATAACTTTTCAAATGAAAACAAGATTGGAAAAGGTGGTTTTGGAGAAGTTTACAAGGGTATCCTTTCTTGTGGACTACATACCGCAGTAAAAAGATTATCACAAAGTTCTACACAAGGTTCCATTGAATTTAAGAATGAAGTTTTATTAATAGCCAAATTACAACACAGGAACCTCGTGGAGTTAATAGGCTTTTGTCTAGAAGCACAAGAGAAGATACTTATATACAAATTCATGCACAATGGGAGTCTTGATAAATTTTTATTTGGTAATCAACAAAAGACATTGAGTTGGTCTCAACGTTTCAAAATTATAGAAGAAATTGCTCGAGGAATTCTTTATTTACATGAACATTCTCGACTTAAAGTTATACATCGTGATATCAAACCTAGCAATATTTTATTAGATAAAAACATGAATCCTAAGATATCAGATTTTGGTTTGGCCAAAATTATGGAAATAGACCAAGATCGTGGAAAGACCAAACGAATAGTTGGAACATATGGTTATATGTCTCCCGAATATGCAATGTTTGGACAATTTTCTGAAAAATCAGATATATTTAGTTTTGGAGTTATGATTTTGGAGATTGTTACAGGAAAAAAGAACATAAATTTTCATGAATCACAATACATGCCAAATGGACTCATGAGCTATGTTTGGAGAAAATGGAAAGACAAAACACAATTGAGCATAATAGACCCACTTTTGGAAGAAAATTATTCTAAAAATGAAGTAATTAAGTGTATTCATATTAGTTTATTATGTGTTCAAGAAAAGAAAAGTATTAGACCTACAATAGCAGATGTTGTTTCATATCTTGATGATCGTCACACACTTGAATTTCCATCCCCACAAGAACCAGCATTTTTCTTAGTGGAGAAGATGGATACAAAAACACCTACAGATTCTGTTAACGAGATGTCCATCAGTACATATTATCCTCGATAA	1938	0.3756	MSLLVYVFFLGFFFNFSITDATEIYYLNHSCSSNKTFTPNNAYETNLRTLLTSLSSHATTAQFFNTTTGGGDGSEIIYASFMCRGDVSNHTCQECVRTAAEQISRVCPISKEALIWYHECLVRYSNRCFFSTLEEWPRFNFMDYNVTNSRNDKGSYGFWLLSKTLSDAVGEAANAGPAGTMKFATKNATVFGSQKIHTLVQCTPDLSSEDCSNCLGDIMRDIPLCCLGRIGGMVLYPSCTLMFGTRHFYRDVNAIQQSKPSGIKMGSPGSIITVVILLVLTMLISFHCYFLWRRARKRKYKILLKENFGQESVTLEGLQFDLAIIEAATNNFSNENKIGKGGFGEVYKGILSCGLHTAVKRLSQSSTQGSIEFKNEVLLIAKLQHRNLVELIGFCLEAQEKILIYKFMHNGSLDKFLFGNQQKTLSWSQRFKIIEEIARGILYLHEHSRLKVIHRDIKPSNILLDKNMNPKISDFGLAKIMEIDQDRGKTKRIVGTYGYMSPEYAMFGQFSEKSDIFSFGVMILEIVTGKKNINFHESQYMPNGLMSYVWRKWKDKTQLSIIDPLLEENYSKNEVIKCIHISLLCVQEKKSIRPTIADVVSYLDDRHTLEFPSPQEPAFFLVEKMDTKTPTDSVNEMSISTYYPR*	646

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g00755	645	Pfam	Protein tyrosine and serine/threonine kinase	334	602	IPR001245	GO:0004672\|GO:0006468
	Phac7g00755	645	CDD	STKc_IRAK	338	604	-	-
	Phac7g00755	645	Gene3D	-	23	129	IPR038408	-
	Phac7g00755	645	Gene3D	-	142	248	IPR038408	-
	Phac7g00755	645	ProSiteProfiles	Protein kinase domain profile.	332	610	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00755	645	FunFam	cysteine-rich receptor-like protein kinase 10	408	610	-	-
	Phac7g00755	645	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	452	464	IPR008271	GO:0004672\|GO:0006468
	Phac7g00755	645	Gene3D	Phosphorylase Kinase; domain 1	294	407	-	-
	Phac7g00755	645	ProSitePatterns	Protein kinases ATP-binding region signature.	338	360	IPR017441	GO:0005524
	Phac7g00755	645	FunFam	Cysteine-rich RLK (RECEPTOR-like protein kinase) 23	293	407	-	-
	Phac7g00755	645	SMART	serkin_6	332	583	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g00755	645	FunFam	Cysteine-rich RLK (RECEPTOR-like protein kinase) 10	24	129	-	-
	Phac7g00755	645	Gene3D	Transferase(Phosphotransferase) domain 1	408	612	-	-
	Phac7g00755	645	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	27	640	-	-
	Phac7g00755	645	ProSiteProfiles	Gnk2-homologous domain profile.	140	248	IPR002902	-
	Phac7g00755	645	ProSiteProfiles	Gnk2-homologous domain profile.	25	129	IPR002902	-
	Phac7g00755	645	Pfam	Salt stress response/antifungal	31	126	IPR002902	-
	Phac7g00755	645	Pfam	Salt stress response/antifungal	161	244	IPR002902	-
	Phac7g00755	645	SUPERFAMILY	Protein kinase-like (PK-like)	316	635	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g00755	Phac-Chr7	4323674	4327677	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g00755	8	645	Receptor kinase-like Gene Family	AT4G05200	42.730	0.0	538

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac7g00755		PK_Tyr_Ser-Thr	5.8e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g00755	-		-	gmx:100792162	974.156