Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00752 ATGCTTTCTGGAGTGTGCATATATAATGAATCATCTTTCTTTCCCTTTGTAATTACTAAAGCCTGTTTTTTTTTCGTGCATGCAGGAAATAATAGTAATGTAGTACGAGCACTCGTCATTGTTGCCCTTGTTATTGTGTCGATAATTCTCTTATGTGGTGTCTGCTATTTCATATTCAAAAGATCAAGGAAGAAATACAATACTCTTCTAAGGGAAAATTTTGGGGAAGAAAGTTCCACTTTGGAATCGCTACAATTTGATTTAGCCACAATGGAAGTTGCCACAAAGAAGTTTTCACTTGAAAACAGGATAGGTGAAGGTGGATTTGGAGATGTTTATAAGGGTATCCTTCCAGATGGACGAGAAATAGCAGTTAAAAAACTTTCTCATAGTTCAGGCCAAGACCCTAATAAAAGTAGTCAAATGAAGTGGTCACAACGCTACAAAATTATTGAAGGAATTACACAAGGAATTTTATATCTACATGAACATTCACGATTAAAAGTTATACATCGTGATCTCAAACCTAGTAATGTGTTACTAGATAATAACATGAATCCAAAGATTTCAGATTTTGGAATGGCAAGAATGGTTGCGGTAGATCAATATGAAGGAAAAACAACCAGAATCGTGGGAACATACGGATATATGTCTCCTGAATATGCAATGTATGGAAATTTTTCGGAAAAATCAGACGTGTTTAGCTTTGGAGTAATAATGTTAGAAATAGTTAGCGGAAAAAAAAATTCTAGACATGTTTTCTCAGATCATGATGACCTCTTGAGTTATGCTTGGGATCAATGGAGGGATCAGACACCAATAAACATATTAGACCAAAATATTAAGGAATCTTGCAATGACAGTGAAGTGGTTAAATGCATCCAAATAGGTTTATTATGTGTACAAGAGAAGCCACAGGACAGACCTACAATGACACAAGTTGTTTCATATCTCAGTGGCTCTTTATCTGAGTTGCCATTGCCTGAAAAACCCATAAATTGTAATCAAAGTGGAATAGTTCAAAGGATGCTAGTTGGAGGATCTAGTTCAGGTTCTGCACTGTCAAAAAATGAAATGTCTGTCACCATATTTATCCCTCGGTAG 1104 0.356 MLSGVCIYNESSFFPFVITKACFFFVHAGNNSNVVRALVIVALVIVSIILLCGVCYFIFKRSRKKYNTLLRENFGEESSTLESLQFDLATMEVATKKFSLENRIGEGGFGDVYKGILPDGREIAVKKLSHSSGQDPNKSSQMKWSQRYKIIEGITQGILYLHEHSRLKVIHRDLKPSNVLLDNNMNPKISDFGMARMVAVDQYEGKTTRIVGTYGYMSPEYAMYGNFSEKSDVFSFGVIMLEIVSGKKNSRHVFSDHDDLLSYAWDQWRDQTPINILDQNIKESCNDSEVVKCIQIGLLCVQEKPQDRPTMTQVVSYLSGSLSELPLPEKPINCNQSGIVQRMLVGGSSSGSALSKNEMSVTIFIPR* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00752 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Phac7g00752 367 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 135 - -
Phac7g00752 367 Gene3D Transferase(Phosphotransferase) domain 1 132 326 - -
Phac7g00752 367 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Phac7g00752 367 FunFam cysteine-rich receptor-like protein kinase 10 127 325 - -
Phac7g00752 367 ProSiteProfiles Protein kinase domain profile. 1 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00752 367 Gene3D Transferase(Phosphotransferase) domain 1 82 131 - -
Phac7g00752 367 Pfam Protein kinase domain 142 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00752 367 SUPERFAMILY Protein kinase-like (PK-like) 81 333 IPR011009 -
Phac7g00752 367 SMART serkin_6 98 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00752 Phac-Chr7 4275080 4278956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00752 31 365 Receptor kinase-like Gene Family AT4G23150 44.072 3.35e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac7g00752 Pkinase 1.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00752 - - var:108324781 543.502