Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00712 ATGTCTCACTCGCCGGATTCTCCCTCCGCCGCTTCTAACTTCCTCTGCCGCGAACACGCCATCGAGGTCACCTCCGACTACCACCGCCCGCCGACACCTCCCTTCCCGGATTCCGATGACCCGCCCATCACCTGCCTCCTCGACGTCGAGCTCCACCACATGCCCGAGAAGGACTACCTCCGCCGCTGCCGCGACCGCGCCATCGACGTCACCGCGCGACTCGATGCCGTCAACTGGATCTTAAAGGTCCACGCATTCTACCAGTTTTCTCCGGTGACGGCATTTCTCTCCGTCAACTATTTGGACCGTTTCCTCTCTCTGTGTTCTCTTCCCCAATCGAGTAGGTGGCCGTTCCAGCTGCTATCAGTGGCATGCCTGTCTCTCGCTGCGAAAATGGAAGAGTCTCGTGTGCCGTTCTTACTCGACCTGCAACTGTTCGAACCCGAATTCGTGTTTGCTCCCAAAACGGTTCAGAGAATGGAGCTTTGGGTCATGTCCAATCTCAAATGGAGACTTCGCTCCGTCACTCCCTACGATTATCTTCACTATTTCATCACCAAGCTCCCTTCTTCCTCTTCCTCCGAATCCACCAATCAGTTTTTCTCCACCGCCTCCAATCTCATCCTTAGCACCACCCGTGTGATTAACTTCTTGGGATTTGCACCCTCCACGGTGGCAGCCGCCGCCGTGCTCTGCGCAGCTGGCCGTGGCATTGCTTCCGCGGACACCCAATTGTCGCCGAGTTTTCATGATAGAGTAAACAATGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACATGGTGGACACGTGTTACGCATCTTGCTCCACCATCAAAGCGAGATTAGCCGAGTCTCCGCCACCATCCAGTCCCATTGGCGTGCTTGACGCTGCCACATGTGTCAGCTGTGACACACCTTCCGAGAGAAATCTTCTCGGCTCAGCCGAATCACAACAGCGAGAAGCCGAGCCACCAAATAAACGGCTTCGATCCACTGCTCCGGATGCACCCCAGCGGTAG 1026 0.5575 MSHSPDSPSAASNFLCREHAIEVTSDYHRPPTPPFPDSDDPPITCLLDVELHHMPEKDYLRRCRDRAIDVTARLDAVNWILKVHAFYQFSPVTAFLSVNYLDRFLSLCSLPQSSRWPFQLLSVACLSLAAKMEESRVPFLLDLQLFEPEFVFAPKTVQRMELWVMSNLKWRLRSVTPYDYLHYFITKLPSSSSSESTNQFFSTASNLILSTTRVINFLGFAPSTVAAAAVLCAAGRGIASADTQLSPSFHDRVNNEMVRCCHQLMEEYMVDTCYASCSTIKARLAESPPPSSPIGVLDAATCVSCDTPSERNLLGSAESQQREAEPPNKRLRSTAPDAPQR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00712 341 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Phac7g00712 341 PANTHER CYCLINS 47 274 IPR039361 -
Phac7g00712 341 Gene3D - 46 263 - -
Phac7g00712 341 SMART Cyclin_C_2 175 305 IPR004367 -
Phac7g00712 341 Pfam Cyclin, N-terminal domain 44 172 IPR006671 -
Phac7g00712 341 Pfam Cyclin, C-terminal domain 175 272 IPR004367 -
Phac7g00712 341 MobiDBLite consensus disorder prediction 311 341 - -
Phac7g00712 341 SUPERFAMILY Cyclin-like 177 271 IPR036915 -
Phac7g00712 341 Gene3D - 56 173 - -
Phac7g00712 341 SMART cyclin_7 78 166 IPR013763 -
Phac7g00712 341 FunFam D2/4-type cyclin 56 169 - -
Phac7g00712 341 SUPERFAMILY Cyclin-like 38 172 IPR036915 -
Phac7g00712 341 FunFam D6-type cyclin 170 263 - -
Phac7g00712 341 CDD CYCLIN_AtCycD-like_rpt1 72 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00712 Phac-Chr7 3949603 3951737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00712 22 294 Core Cell Cycle Gene Families AT1G70210 41.007 1.11e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00712 K18810 - gmx:100776178 479.944