Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00689 ATGGAATCTTCTCAACACATTTCTGAAGAATGGGGTTCTCTTTATGGATTGCACACAACTGAAGAAGCTGACTTTATGGCTCAGTTGTTTGGAGAAAAACACTATGGAAATACCACTTTAGGCTTTTGGCCTGGCCATGAATCCACAACAGTGACCATTAAAGGCACTGATAGCAACTCATACTTCCTTTCAAATGTTACAGACATTAATTTATGTTTTTTACAAGGGAGCAGCTGCAGCATTGATACTGGTAATAGTATCTTTTCCACTACAAGTAGTGGACCCTACTCATGTGATCCAGCAACAAACTTTGACTCTGTGTCCATGGCTTTTTGCCTGGGAGATGCCCAATTTAGTCCACATAGTTTTCAGTGTAATGACAACTCAAGCCTACAGATAAATGAAAACACTGATGAAGAGTCAAGTCTAGACCCAGTAGCTCTTGCTGACAACAATTTGCAGGCTAAGAGGGAGTATGAGATGATGGTTTCTGAACATGTACAAGAGGTCAGAAGTGGAAACCTGGAGAACCTAACAAAAAGACTTAGGAGCTCAAAAGAGGTCTCACAAACATTGAGGAACGCTAAGTTGAAGAAAAATTCAAAATCTGCTTCAATGAACAAGAATGAAGATGACAGAAGCTTGAACCTCCAAGGGCTTGGTTGTTTTTCACAGGGTGATTCTAGTGCTTCTCTGAAGCCAAATGGGGGAACATCGAAAGATCCTGCACCTCCCAATTTGCTTCGAAAATCAAGAGCAAGTAACGGTCCTGCCACTGATCCACAGAGCCTTTATGCAAGAAAGAGAAGAGAAAGAATAAATGAAAGGTTGAGAATACTGCAAAGTCTTGTCCCCAACGGAACTAAGGTGGATATCAGCACCATGCTTGATGAAGCAGTGCAATACGTTAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGCTCTGACGACATGTGGATGTATGCCCCAATAGCTTACAATGGTATAAACATTGGACTTGACCTCATAGAAAAAGAAGAGCCACACCTAAGAAAGAAAATGGATCCTACTGACCAAATTTCTGAAGAATGGAGCTCTCTTAGTGGCTTTTGCACAGCTGAGGAAGCTGACTTCATGAGCCAGTTGCTGGGAAACTGCTCACTCCCTGAAAATCTCAGTGGAAATTTCCACTTGGGAATTCCATCTGCGACATGGCCTGGCCATGAATCAACAATAGTGACCGTGACAAGCATCAATGAAAGTCCATATTTTCCTACAACCGCTGATAATAGTAATAGTAGTTATTTATGTTTTTCACAAGGAAGTAGCTCCACTTCTGATAGTAGCAATATATTTCCTGCTACAAGTGGCAATAAACACTGCTTGAATGACCCAGTAGCCAACATTGGCTACATGTCCATGGGTTTTGCCAAGTTCAGCCCATATAATGTTCAAGGGAGTCACAACCAACAGATGAATGAAAACACTGATCAAGATTTAGGTCTAGAGGTTATTGCTGACAAGAATTCGCTGGATCATCAGGAATGTGAAGTACTAGTTTCTGAAGCAGCAAAAGAGGATATAACCACCAATCTGGAGAAGTCGGGAAAAAGATCAAGGGGCTCAATGCAGGTACGAAAGAGCAAGAAAAATGCTAAATCCGTGAAGAAACCAAAATCTGATTCTATAAGTAACTCTGAAGAGGGTAGAAGTCCTGATCTTCAGGGTTGCTGCTCAGAGGATGATGACTCCAATGCTTCTCAGGAGCTAAATGGAGGAGGAGGATCTTCAAGTTTGAGCCTGGAGGATTCTACATACCTTAAGTTGAAGGGGAAAAAATCAACAGCTAGTAGAGGTTCTGCTACTGATCCACAAAGTGTATATGCAAGGGTATGTATTTCATCAAATTAA 1890 0.4132 MESSQHISEEWGSLYGLHTTEEADFMAQLFGEKHYGNTTLGFWPGHESTTVTIKGTDSNSYFLSNVTDINLCFLQGSSCSIDTGNSIFSTTSSGPYSCDPATNFDSVSMAFCLGDAQFSPHSFQCNDNSSLQINENTDEESSLDPVALADNNLQAKREYEMMVSEHVQEVRSGNLENLTKRLRSSKEVSQTLRNAKLKKNSKSASMNKNEDDRSLNLQGLGCFSQGDSSASLKPNGGTSKDPAPPNLLRKSRASNGPATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLDEAVQYVKFLQLQIKLLSSDDMWMYAPIAYNGINIGLDLIEKEEPHLRKKMDPTDQISEEWSSLSGFCTAEEADFMSQLLGNCSLPENLSGNFHLGIPSATWPGHESTIVTVTSINESPYFPTTADNSNSSYLCFSQGSSSTSDSSNIFPATSGNKHCLNDPVANIGYMSMGFAKFSPYNVQGSHNQQMNENTDQDLGLEVIADKNSLDHQECEVLVSEAAKEDITTNLEKSGKRSRGSMQVRKSKKNAKSVKKPKSDSISNSEEGRSPDLQGCCSEDDDSNASQELNGGGGSSSLSLEDSTYLKLKGKKSTASRGSATDPQSVYARVCISSN* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00689 629 FunFam Basic helix-loop-helix transcription factor 258 315 - -
Phac7g00689 629 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 257 306 IPR011598 GO:0046983
Phac7g00689 629 MobiDBLite consensus disorder prediction 210 236 - -
Phac7g00689 629 SMART finulus 263 312 IPR011598 GO:0046983
Phac7g00689 629 MobiDBLite consensus disorder prediction 523 595 - -
Phac7g00689 629 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 127 330 - -
Phac7g00689 629 Coils Coil 175 195 - -
Phac7g00689 629 Gene3D - 261 315 IPR036638 GO:0046983
Phac7g00689 629 MobiDBLite consensus disorder prediction 188 202 - -
Phac7g00689 629 MobiDBLite consensus disorder prediction 560 595 - -
Phac7g00689 629 MobiDBLite consensus disorder prediction 174 268 - -
Phac7g00689 629 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 323 IPR036638 GO:0046983
Phac7g00689 629 CDD bHLH_AtIND_like 258 320 - -
Phac7g00689 629 Pfam Helix-loop-helix DNA-binding domain 267 307 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00689 Phac-Chr7 3806555 3812339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00689 1 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 36.927 5.05e-49 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g00689 HLH 6.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00689 - - gmx:100816788 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00689 7 3806555 3812339 Phac7g00689 7 3806555 3812339 ECH