Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00687 ATGGAATCTTCTCAACACATTTCTGAAGAATGGGGTTCTCTTTATGGATTGCACACAACTGAAGAAGCTGACTTTATGGCTCAGTTGTTTGGAGAAAAACACTATGGAAATACCACTTTAGGCTTTTGGCCTGGCCATGAATCCACAACAGTGACCATTAAAGGCACTGATAGCAACTCATACTTCCTTTCAAATGTTACAGACATTAATTTATGTTTTTTACAAGGGAGCAGCTGCAGCATTGATACTGGTAATAGTATCTTTTCCACTACAAGTAGTGGACCCTACTCATGTGATCCAGCAACAAACTTTGACTCTGTGTCCATGGCTTTTTGCCTGGGAGATGCCCAATTTAGTCCACATAGTTTTCAGTGTAATGACAACTCAAGCCTACAGATAAATGAAAACACTGATGAAGAGTCAAGTCTAGACCCAGTAGCTCTTGCTGACAACAATTTGCAGGCTAAGAGGGAGTATGAGATGATGGTTTCTGAACATGTACAAGAGGTCAGAAGTGGAAACCTGGAGAACCTAACAAAAAGACTTAGGAGCTCAAAAGAGGTCTCACAAACATTGAGGAACGCTAAGTTGAAGAAAAATTCAAAATCTGCTTCAATGAACAAGAATGAAGATGACAGAAGCTTGAACCTCCAAGGGCTTGGTTGTTTTTCACAGGGTGATTCTAGTGCTTCTCTGAAGCCAAATGGGGGAACATCGAAAGATCCTGCACCTCCCAATTTGCTTCGAAAATCAAGAGCAAGTAACGGTCCTGCCACTGATCCACAGAGCCTTTATGCAAGAAAGAGAAGAGAAAGAATAAATGAAAGGTTGAGAATACTGCAAAGTCTTGTCCCCAACGGAACTAAGGTGGATATCAGCACCATGCTTGATGAAGCAGTGCAATACGTTAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGCTCTGACGACATGTGGATGTATGCCCCAATAGCTTACAATGGTATAAACATTGGACTTGACCTCATAGAAAAAGAAGAGCCACACCTAAGAAAGAAAATGGATCCTACTGACCAAATTTCTGAAGAATGGAGCTCTCTTAGTGGCTTTTGCACAGCTGAGGAAGCTGACTTCATGAGCCAGTTGCTGGGAAACTGCTCACTCCCTGAAAATCTCAGTGGAAATTTCCACTTGGGAATTCCATCTGCGACATGGCCTGGCCATGAATCAACAATAGTGACCGTGACAAGCATCAATGAAAGTCCATATTTTCCTACAACCGCTGATAATAGTAATAGTAGTTATTTATGTTTTTCACAAGGAAGTAGCTCCACTTCTGATAGTAGCAATATATTTCCTGCTACAAGTGGCAATAAACACTGCTTGAATGACCCAGTAGCCAACATTGGCTACATGTCCATGGGTTTTGCCAAGTTCAGCCCATATAATGTTCAAGGGAGTCACAACCAACAGATGAATGAAAACACTGATCAAGATTTAGGTCTAGAGGTTATTGCTGACAAGAATTCGCTGGATCATCAGGAATGTGAAGTACTAGTTTCTGAAGCAGCAAAAGAGGATATAACCACCAATCTGGAGAAGTCGGGAAAAAGATCAAGGGGCTCAATGCAGGTACGAAAGAGCAAGAAAAATGCTAAATCCGTGAAGAAACCAAAATCTGATTCTATAAGTAACTCTGAAGAGGGTAGAAGTCCTGATCTTCAGGGTTGCTGCTCAGAGGATGATGACTCCAATGCTTCTCAGGAGCTAAATGGAGGAGGAGGATCTTCAAGTTTGAGCCTGGAGGATTCTACATACCTTAAGTTGAAGGGGAAAAAATCAACAGCTAGTAGAGGTTCTGCTACTGATCCACAAAGTGTATATGCAAGGAGAAGAAGAGAAAGAATAAATGAAAGATTGAAAATCCTACAAAACCTTGTCCCCAATGGAACCAAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTTCAATATGTGAAGTTTTTACAACTCCAAATTAAGGTAACAACTTGA 2013 0.4118 MESSQHISEEWGSLYGLHTTEEADFMAQLFGEKHYGNTTLGFWPGHESTTVTIKGTDSNSYFLSNVTDINLCFLQGSSCSIDTGNSIFSTTSSGPYSCDPATNFDSVSMAFCLGDAQFSPHSFQCNDNSSLQINENTDEESSLDPVALADNNLQAKREYEMMVSEHVQEVRSGNLENLTKRLRSSKEVSQTLRNAKLKKNSKSASMNKNEDDRSLNLQGLGCFSQGDSSASLKPNGGTSKDPAPPNLLRKSRASNGPATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLDEAVQYVKFLQLQIKLLSSDDMWMYAPIAYNGINIGLDLIEKEEPHLRKKMDPTDQISEEWSSLSGFCTAEEADFMSQLLGNCSLPENLSGNFHLGIPSATWPGHESTIVTVTSINESPYFPTTADNSNSSYLCFSQGSSSTSDSSNIFPATSGNKHCLNDPVANIGYMSMGFAKFSPYNVQGSHNQQMNENTDQDLGLEVIADKNSLDHQECEVLVSEAAKEDITTNLEKSGKRSRGSMQVRKSKKNAKSVKKPKSDSISNSEEGRSPDLQGCCSEDDDSNASQELNGGGGSSSLSLEDSTYLKLKGKKSTASRGSATDPQSVYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKVTT* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00687 670 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 257 306 IPR011598 GO:0046983
Phac7g00687 670 MobiDBLite consensus disorder prediction 210 236 - -
Phac7g00687 670 FunFam Basic helix-loop-helix transcription factor 614 670 - -
Phac7g00687 670 FunFam Basic helix-loop-helix transcription factor 258 315 - -
Phac7g00687 670 MobiDBLite consensus disorder prediction 523 595 - -
Phac7g00687 670 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 323 IPR036638 GO:0046983
Phac7g00687 670 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 613 668 IPR036638 GO:0046983
Phac7g00687 670 Coils Coil 175 195 - -
Phac7g00687 670 SMART finulus 619 668 IPR011598 GO:0046983
Phac7g00687 670 SMART finulus 263 312 IPR011598 GO:0046983
Phac7g00687 670 MobiDBLite consensus disorder prediction 188 202 - -
Phac7g00687 670 MobiDBLite consensus disorder prediction 174 268 - -
Phac7g00687 670 MobiDBLite consensus disorder prediction 560 595 - -
Phac7g00687 670 Gene3D - 261 315 IPR036638 GO:0046983
Phac7g00687 670 Gene3D - 613 669 IPR036638 GO:0046983
Phac7g00687 670 Pfam Helix-loop-helix DNA-binding domain 623 663 IPR011598 GO:0046983
Phac7g00687 670 Pfam Helix-loop-helix DNA-binding domain 267 307 IPR011598 GO:0046983
Phac7g00687 670 CDD bHLH_AtIND_like 258 320 - -
Phac7g00687 670 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 126 330 - -
Phac7g00687 670 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 613 662 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00687 Phac-Chr7 3806555 3813053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00687 356 668 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 34.656 3.56e-34 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g00687 HLH 6.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00687 - - gmx:100817334 511.531