Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00683 ATGGCTTTGGAGGCTTTGAATTCTCCAACAGCAGCCGCCACTCCCTTCCGTGCCTACCAAGAGGAGGAGGACCTTGACCTTCAGTTCCGCGAGCCTTGGTCTAAGAGAAAACGCTCCAAACGACCGCGTTTTGAGACCGAGGAAGAGTACCTCGCTCTTTGCCTCATCATGCTCGCACAGAGCGGAAACAACAACAACAGCAACAACACCAACGCTTCTTCTCGCCGCCAAACTCAACAGTCACCGTCACCGTCACAGTCACAGAAAGAACCGTCACCGCCGCTGAAATTATCCCACAGGTGCACCGTTTGCAGCAAGGCCTTTCCTTCTTATCAAGCGCTCGGTGGACACAAGGCCAGCCACCGCAAGTCCTCGTCCGAATCCACCTCTGTCTCCGTCGTCGCCAACGACAGCGGTACCGCTTCCACCGTCGGCGGCGGCGGAAGGATGCACGAGTGTTCCATCTGTCACAAGAGTTTCCCCACCGGACAGGCCCTGGGTGGCCACAAGCGCTGCCACTACGACGGCGGCAACCACCACAGCAACAGCAACGCCAACGCCAACAACGGCAGCGCCGTCACTTCCTCCTCCGACGGCGTCGGCGGCGGTGCCGCCTCCTCCCACACGCTCCGTGGGTTTGACCTGAACCTTCCGGCGCCGCTGACGGAGTTCTGGTCGCCAGCGGCGTTCGACTTCAGGAAGAAGGTCGGCGGAGTCGGCGAGCAGGAGGTGGAAAGCCCGTTGCCGGTAACCGCCGCCAAGAAAGCGCGTTTGTTTTCAAGGGAGGACCACGATGATGAAACGGCGTAG 810 0.6012 MALEALNSPTAAATPFRAYQEEEDLDLQFREPWSKRKRSKRPRFETEEEYLALCLIMLAQSGNNNNSNNTNASSRRQTQQSPSPSQSQKEPSPPLKLSHRCTVCSKAFPSYQALGGHKASHRKSSSESTSVSVVANDSGTASTVGGGGRMHECSICHKSFPTGQALGGHKRCHYDGGNHHSNSNANANNGSAVTSSSDGVGGGAASSHTLRGFDLNLPAPLTEFWSPAAFDFRKKVGGVGEQEVESPLPVTAAKKARLFSREDHDDETA* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00683 269 MobiDBLite consensus disorder prediction 19 44 - -
Phac7g00683 269 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
Phac7g00683 269 SMART c2h2final6 151 173 IPR013087 -
Phac7g00683 269 SMART c2h2final6 99 121 IPR013087 -
Phac7g00683 269 SUPERFAMILY beta-beta-alpha zinc fingers 99 173 IPR036236 -
Phac7g00683 269 MobiDBLite consensus disorder prediction 125 143 - -
Phac7g00683 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Phac7g00683 269 MobiDBLite consensus disorder prediction 183 203 - -
Phac7g00683 269 MobiDBLite consensus disorder prediction 62 93 - -
Phac7g00683 269 MobiDBLite consensus disorder prediction 1 44 - -
Phac7g00683 269 MobiDBLite consensus disorder prediction 239 269 - -
Phac7g00683 269 MobiDBLite consensus disorder prediction 115 147 - -
Phac7g00683 269 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 36 219 IPR044653 GO:0003700
Phac7g00683 269 Pfam C2H2-type zinc finger 151 175 - -
Phac7g00683 269 Pfam C2H2-type zinc finger 99 123 - -
Phac7g00683 269 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Phac7g00683 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 173 IPR013087 -
Phac7g00683 269 MobiDBLite consensus disorder prediction 183 206 - -
Phac7g00683 269 Gene3D Classic Zinc Finger 97 173 - -
Phac7g00683 269 MobiDBLite consensus disorder prediction 62 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00683 Phac-Chr7 3774377 3775771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00683 1 265 C2H2 Transcription Factor Family AT3G19580 42.333 2.69e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g00683 zf-C2H2_6 1.4e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00683 - - vun:114192483 379.022