Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00679 ATGAGCTGCAATGGTTGTCGTGTTCTCAGAAAGGGTTGCAGTGAGAACTGCATGCTACGACATTGCCTACAATGGATAGAGAACCCACAAGCCCAAGCTCACGCCACCCTCTTTGTGGCCAAGTTCTTTGGCCGTGCTGCTCTCATGTCTTTCCTTTCCTCCGTACCTGCCAACCAAAGATCCGCTTTGTTTCAGTCACTGCTTTATGAAGCAGTGGGGCGTACTATAAATCCAGTGAATGGAGCAGTGGGGCTGTTGTGGACTGGGAACTGGCAGCTGTGCCAAATGGGTGTGGAGAAAGTGCTCCGAGGTGGTGCTGCGTTGACCCCACTCCCTCACTTCTTGAGTAGTGCAGATGAACACCATGTAACTGAGAGAGTGATGGTTGGAGGTGGAATATTGTGTCACCAGGCAAAGAAGCAACGTGTGGGGACACCCTCTCAGGAATCTGAGACCTCCTATTTGGGACGTAAACCACAGGATTGTGCTCCTCAAAGTCAAAGGAACCTCCTTACACTATTCTTATGA 528 0.5038 MSCNGCRVLRKGCSENCMLRHCLQWIENPQAQAHATLFVAKFFGRAALMSFLSSVPANQRSALFQSLLYEAVGRTINPVNGAVGLLWTGNWQLCQMGVEKVLRGGAALTPLPHFLSSADEHHVTERVMVGGGILCHQAKKQRVGTPSQESETSYLGRKPQDCAPQSQRNLLTLFL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00679 175 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Phac7g00679 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 123 - -
Phac7g00679 175 MobiDBLite consensus disorder prediction 141 163 - -
Phac7g00679 175 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Phac7g00679 175 MobiDBLite consensus disorder prediction 140 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00679 Phac-Chr7 3748879 3751046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00679 1 116 AS2 family AT3G49940 75.862 2.24e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac7g00679 LOB 3.5e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00679 7 3748879 3751046 Phac7g00679 7 3748879 3751046 ECH