Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00645 ATGACTAGTCCAATTGGAGAATTGACCAGCAGTAACAACAGTACCGCCGGAGGGATGAGTACTGAACAATCTGAATTGTCTGAAAAAACACAGTTAGGGACTGATCATTTACTAAAGGAACAAAGGGAGTCCGGTACTGTGTTAACCAGTTCAGTTATGGATGAAAAATCCAATCAAGTTTCTGCTAATGCGACAGAGAATTCTGTTATTTTACTGCCTGCACCACCTCAACATGACTCAGAAAAGAAATGTCAGACTGTAGAAGGTTCACACCTTCAACAAAGTACCGATAAAGAAGTATCTTTACAGTTATCTAACGATGAGCCAGAAAACCCATCCCAACCATTGTCTGAAAATGAACCTGTGGAATCCGCACCTGCCTTTGCTGGGAATGGCCTAAAGCAATCAAGTCCAGCTCTAGCGAATACAACTTATGTGAATAATATGTTGGATCCACCTTCTGGAGATGTTGTGACCAATTGTTCAGAAAAAGTGTCTAATAGCCCCGCCAATTCGCAATTGAGGCGCAAGGGTAAAAAAAACTCAAAATTGTTGAAGAAGACATATATGCTACGATCAGTTGGAAGCAGTGACAGAGCTTTGCGGTCCAAAACAAAAGAAAATCCTAAGACACCTGAACCAAATAGTAATTTGGTCGATTGTAATAATAATAACAACAATGATGGAGTCAAGAAGAAAAGTTGTAGGAAGAAGAGAAAGAGTGGAGAGGTTGGAATTACTGATCAATTCTCCAGAATCAAATCTCACTTAAGATATTTATTAAACAGAATAGGCTACGAGAAAAGCTTGATTGATGCTTATTCTGCTGAGGGCTGGAAAGGATACAGTATGGAAAAATTGAAGCCTGAGAAAGAGCTTCAACGGGCCAAGTCTGAAATTATTCGACGCAAATTGAACATCAGGGATCTGTTTCGAAATTTGGATTCATTGTGTACTGAAGGAAAGCTACCAGAGTCTCTATTTGATTCTGAGGGAGAGATTGACAGTGAGGATATATTCTGTGCAAAGTGCCACTCCAAAGAGTTGAGCTCTAATAATGATATAATTCTCTGTGATGGTGTCTGTGACCGTGGCTTTCACCAGCTCTGTTTGGATCCTCCGTTGTTAACTGAAGATATTCCACCTGGTGATGAGGGTTGGTTATGCCCTGGATGTGATTGCAAAGATGACTGCATGGACCTTATTAATGACTCCTTTGGAACAAGTCTCTCTATTAGTGACACCTGGGAGAGGGTTTTTCCTGAAGCAGCTGCTGCTGCTGGAAATAAGATGGATAACAACTTGGGACTCCCTTCTGATGATTCTGACGATGATGATTATAATCCTAATGGTCCAGAGGATGTGAAAGTTGAAGGAGACGAATCAAGTTCTGATGAATCTGACTATGCTTCTGCTTCTGAGAATTTGGAGGGTTCACATGGGGATCAATACATGGGCCTTCCATCTGAAGATTCTGATGATGGTGATTATGACCCTGCTGCTCCAGATGCTGACTCTAAAGTTAATGAAGAAAGTTCAAGCTCTGACTTCACATCTGACTCTGATGATCTATCTGCTGCAATTGTGGAGAATACGTCCCCTGGACAGGATGGTGAAATCAGATCTGCATCATTGGATGATGTTAAGTACTTGAACAGTTATGGCAAAAGAAAGGGTAAAGCTGGTAAGAAGCCATCTATGGCTGATGAACTGTCATCTTTACTAGAGCCAGATTCTGGTCAAGAAGGTTCTACACCTGTTTCTGGGAGAAGGAACTTGGAAAGGTTGGACTACAAAAAGCTGTATGATGAGACATACCACAGTGATCCTAGTGAGGATGAAGATTGGACAGCCACTGTTACTCCAAGTAGAAAGAAGAAAGACAGCGATACTAGTGAGGATGAAGATTGGACAGCCACTATTACTCCAAGTAGAAAGAAGAAAGGCAATGCAACTCCAGTGTCACCAGATGGAAATGCTTCAAATAATTCCATGCACACTCCTAAGAGGAATGGCCATCAGAAGAAATTTGAAAATACAAAAAATTCACCTGCTAAATCACTTGATGACCATGTGAAATCTGATTCTAGGAAACAAAAGTCTAGATCTTCAGCATACAAAAGACTAGGAGAAGCTGTTGTTCAGAGACTTCTCATATCTTTTAAAGAAAATCAGTATCCAGATAGAACCACAAAAGAAAGCTTGGCACAAGAACTTGGACTTACTTGTCAGCAGGTTGCCAAATGGTTTGACAATACACGATGGAGCTTCCGGCATTCATCACAAATGGAAACCAATTCAGGTAGAAATACTTTACAGCAAGCTACTGATAGTAGAGCTGAAAATGAGGAGGGTGAATGTGAATTAAGGTCCCTGGAGGTCAGTGGAGAAATATCAAAAGCCCCAAGCTCTGGAAAAAGAAAGCATTTGTCAGAACACCAACTATCTGAAACACAGCTGGATATCAATGGCTTGGCAACAAGTTCACCAAATGCTCATCAAACCCAAATGGGCAAGAAAATGAAGACAAGGAGAAGGAAATGA 2544 0.4092 MTSPIGELTSSNNSTAGGMSTEQSELSEKTQLGTDHLLKEQRESGTVLTSSVMDEKSNQVSANATENSVILLPAPPQHDSEKKCQTVEGSHLQQSTDKEVSLQLSNDEPENPSQPLSENEPVESAPAFAGNGLKQSSPALANTTYVNNMLDPPSGDVVTNCSEKVSNSPANSQLRRKGKKNSKLLKKTYMLRSVGSSDRALRSKTKENPKTPEPNSNLVDCNNNNNNDGVKKKSCRKKRKSGEVGITDQFSRIKSHLRYLLNRIGYEKSLIDAYSAEGWKGYSMEKLKPEKELQRAKSEIIRRKLNIRDLFRNLDSLCTEGKLPESLFDSEGEIDSEDIFCAKCHSKELSSNNDIILCDGVCDRGFHQLCLDPPLLTEDIPPGDEGWLCPGCDCKDDCMDLINDSFGTSLSISDTWERVFPEAAAAAGNKMDNNLGLPSDDSDDDDYNPNGPEDVKVEGDESSSDESDYASASENLEGSHGDQYMGLPSEDSDDGDYDPAAPDADSKVNEESSSSDFTSDSDDLSAAIVENTSPGQDGEIRSASLDDVKYLNSYGKRKGKAGKKPSMADELSSLLEPDSGQEGSTPVSGRRNLERLDYKKLYDETYHSDPSEDEDWTATVTPSRKKKDSDTSEDEDWTATITPSRKKKGNATPVSPDGNASNNSMHTPKRNGHQKKFENTKNSPAKSLDDHVKSDSRKQKSRSSAYKRLGEAVVQRLLISFKENQYPDRTTKESLAQELGLTCQQVAKWFDNTRWSFRHSSQMETNSGRNTLQQATDSRAENEEGECELRSLEVSGEISKAPSSGKRKHLSEHQLSETQLDINGLATSSPNAHQTQMGKKMKTRRRK* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00645 847 ProSiteProfiles Zinc finger PHD-type profile. 338 395 IPR019787 -
Phac7g00645 847 MobiDBLite consensus disorder prediction 193 236 - -
Phac7g00645 847 SUPERFAMILY Homeodomain-like 699 763 IPR009057 -
Phac7g00645 847 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 334 397 IPR013083 -
Phac7g00645 847 MobiDBLite consensus disorder prediction 671 705 - -
Phac7g00645 847 CDD PHD_PRHA_like 340 392 IPR045876 -
Phac7g00645 847 MobiDBLite consensus disorder prediction 427 708 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 816 837 - -
Phac7g00645 847 FunFam Homeobox protein HAT3.1 702 771 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 592 642 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 163 182 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 643 668 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 1 136 - -
Phac7g00645 847 Pfam PHD-finger 340 395 IPR019787 -
Phac7g00645 847 MobiDBLite consensus disorder prediction 210 229 - -
Phac7g00645 847 Pfam Homeodomain 713 756 IPR001356 GO:0003677
Phac7g00645 847 SMART PHD_3 340 393 IPR001965 -
Phac7g00645 847 Gene3D - 695 768 - -
Phac7g00645 847 CDD homeodomain 714 761 IPR001356 GO:0003677
Phac7g00645 847 MobiDBLite consensus disorder prediction 43 70 - -
Phac7g00645 847 SMART HOX_1 698 764 IPR001356 GO:0003677
Phac7g00645 847 ProSitePatterns Zinc finger PHD-type signature. 341 392 IPR019786 -
Phac7g00645 847 MobiDBLite consensus disorder prediction 1 31 - -
Phac7g00645 847 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 116 818 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 779 793 - -
Phac7g00645 847 SUPERFAMILY FYVE/PHD zinc finger 330 398 IPR011011 -
Phac7g00645 847 FunFam Homeobox protein HAT3.1 321 399 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 87 120 - -
Phac7g00645 847 ProSiteProfiles 'Homeobox' domain profile. 700 760 IPR001356 GO:0003677
Phac7g00645 847 MobiDBLite consensus disorder prediction 761 847 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 507 539 - -
Phac7g00645 847 MobiDBLite consensus disorder prediction 761 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00645 Phac-Chr7 3574959 3583675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00645 194 808 Homeobox Transcription Factor Family AT3G19510 43.838 1.18e-134 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Phac7g00645 PHD 2.8e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00645 - - gmx:100811458 1138.64