Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00590 ATGGCAATTCAGCAACACAATCACCAACTACAACATAATGAGAATGTCTCATCTGTTCTTGATGCCCTTTACTGTGATGAAGCAAAGTGGGAAGAAGAGGATGAAGACAGTGATGTCACAACAAACAATGATGCATGTGGGGTGCATGTGCACCACTCTGCCGGAGCTTCTCTCTTCCCTCTGCTCTTGTTGGAGCAAGACTTGTTCTGGGAAGACGAGGAACTGAGCTCTCTCTTTTCCAAAGAGAAGCTTCAACATGAACAAGTTTATGGCTATAACAATCTCAACAGTGATAGTAATGATAATAACAATCATGTGCATTTGAACCCTTCTTTCTCTCAGCCTCGTCGTGAGGCAGTGGAATGGATGCTTAAAGTCAATGCTCACTATGGATTCTCTGCTCTCACTGCAACACTGGCCGTTACTTACCTGGATAGGTTCCTTCTAAGCTTCCATTTTCAAAGGGAGAAGCCTTGGATGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCTGCTAAAGTTGAAGAAACTCAAGTGCCCCTTCTCTTGGACCTTCAAGTGCAAGACACTAAGTATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTGCTGGTGCTGTCCACCCTCAAATGGAAGATGCATCCCGTGACCCCACTCTCGTTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACTCATCTTCACTGGGAGTTTCTCAGGCGCTGTGAGCATCTTCTTCTGTCTGTGCTTTTAGATTCGAGATTTGTTGGGTGCCTTCCCTCTGTTTTGGCCACTGCAACAATGCTGCATGTTATAGACCAGATTGAACACAGTGGTGGGATGGAATACAAAAATCAGCTTCTGAGTGTTCTCAAAATTAGCAAGGAGAAAGTAGATGAGTGTTATAATGCTATTCTCCAACGCTCAAACGCCAATAATTATGGTGATAACAACAACATTTTCAAACGCAAGTATGAGGAAATTCCAGACAGCCCAAGTGGCGTAATTGATGCTGCATTTGGCTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATATTCACCACCAGAGCCTCTGTTCAAGAAGAGCAGAACCCAAGGACAACAAATGAAATTGTCACCACTTAATCGGGTCATTGTCGGAATTGTTGGCACCTCTCCTTGA 1182 0.4425 MAIQQHNHQLQHNENVSSVLDALYCDEAKWEEEDEDSDVTTNNDACGVHVHHSAGASLFPLLLLEQDLFWEDEELSSLFSKEKLQHEQVYGYNNLNSDSNDNNNHVHLNPSFSQPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLSVLLDSRFVGCLPSVLATATMLHVIDQIEHSGGMEYKNQLLSVLKISKEKVDECYNAILQRSNANNYGDNNNIFKRKYEEIPDSPSGVIDAAFGSDGSNDSWAVGSSLYSPPEPLFKKSRTQGQQMKLSPLNRVIVGIVGTSP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00590 393 FunFam D3-type cyclin 109 216 - -
Phac7g00590 393 SMART Cyclin_C_2 218 347 IPR004367 -
Phac7g00590 393 SUPERFAMILY Cyclin-like 111 216 IPR036915 -
Phac7g00590 393 Gene3D - 114 216 - -
Phac7g00590 393 SUPERFAMILY Cyclin-like 219 328 IPR036915 -
Phac7g00590 393 CDD CYCLIN_AtCycD-like_rpt1 116 213 - -
Phac7g00590 393 PANTHER CYCLINS 76 310 IPR039361 -
Phac7g00590 393 CDD CYCLIN_AtCycD-like_rpt2 218 308 - -
Phac7g00590 393 ProSitePatterns Cyclins signature. 116 147 IPR006671 -
Phac7g00590 393 SMART cyclin_7 121 209 IPR013763 -
Phac7g00590 393 Gene3D - 217 308 - -
Phac7g00590 393 Pfam Cyclin, N-terminal domain 106 215 IPR006671 -
Phac7g00590 393 Pfam Cyclin, C-terminal domain 218 329 IPR004367 -
Phac7g00590 393 FunFam CYCLIN D32 217 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00590 Phac-Chr7 3286511 3289103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00590 1 310 Core Cell Cycle Gene Families AT4G34160 55.484 5.35e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00590 K14505 - gmx:547740 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00590 7 3286511 3289103 Phac7g00590 7 3286511 3289103 ECH
Phac9g01544 9 12566108 12568785 Phac7g00590 7 3286511 3289103 ECH