Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00562 ATGGCAGGTTTTGGCGGGAAAAAAGTGCACCAAATGATCGTCGGTTTCGGCGGGAGTGGCTTCGGCCAGGTCGCTATCGCTGTCGCCATCTCCTTCCTCGTCCGCGTCTTCTCCGCTCCCGGCCCTGCTCTCTCGCCGGAAAACGACCCCGATGATACGCTGGAGAACGGTTCTGACGATGCCGAAGCTGGTGCCACCGGAAAGGTCACACCGGTCACAATCAGCTGGAGAAACATCAATTGCTCCCTTTCGGATAAATCCTCCAAGTCCGTGAGGTTTCTGCTTAGAAATGTCAGTGGAGAAGCGAAGCCTGGAAGGTTATTAGCCATAATGGGACCTTCAGGTTCAGGGAAGACAACGTTGCTTAATGTTCTTGCGGGTCAGCTCACGGCATCTCCTCGGTTGCATTTGAGTGGCGTTTTGGAGTTCAATGGAAAGCCTGCTTCGAAGAACGCGTACAAGTTTGCATATGTGAGACAGGAGGATCTCTTTTTCTCGCAGCTCACTGTGCGGGAGACTTTGTCTCTTGCTACCGAACTTCAGCTTCCCAACATATCTTCTGCGGAAGAGAGGGATGAGTTCGTGAACACTCTCCTTTTCAAACTAGGCTTGGTTAGTTGTGCTGATACCAATGTTGGTGATGCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGTTTGTCCATGGCATGTGAACTGCTTGCAAGTCCATCTGTTATATTTTCCGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAGCAACTTGCACAAGATGGTCATACTGTTATATGTTCTATACATCAACCAAGAGGTTCAGTGTATAGTAAATTTGACGATATCATCTTGCTAACAGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCACTGGCATACTTCTCAAAATTTGGGTACCAGTGCCCAGATCATATAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTTCTGATAGTGTCTACACCTCTAGAAAAAGAATTGATGGTCTTGTTGAGTCATTCTCGGAAAGGTTATCAGGAGTTATATATGCAACTCCAATTACCGTAAACAATCTCTCGAACAGTAGAAAGAAAATCAGCCAGAGGGCAGTAGCAAAGAAGAAAGGAGTTTGGTGGAAGCAATTTTGGTTGCTCCTTAAAAGAGCATGGATGCAGGCTTCACGGGATGCACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCATCGGCAATTATCTTTGGGTCAGTATTTTGGAGAATGGGAAATTCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTACTGCAATAAACACAGCTATGGCTGCCCTCACAAAGACCGTAGGTGTGTTTCCAAAGGAACGGGCAATTGTAGATAGAGAACGTGCTAAAGGCTCCTATTCCCTTGGTCCCTATCTGTTGTCAAAATTGTTGGCTGAGCTTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTACTGTTTTGTATCCGATGGCACGTCTTCATCCTACTTTGCAGAGATTTGGAAAGTTCTGCGGCATTATCACTATGGAATCTTTTGCTGCATCTGCTATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGTCCCTCTCTCATGACAGTTTTTATTGTTTTTGGAGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTTGTTCTCTGATTAGATGGGCTTTTCAGGGAGTTTCTATCAACGAATTTAGTGGCCTTCAATTTGACCATCAACACTCATTTGATATTCAAACTGGAGAACAGGCGCTAGAGCGAATTTCCTTTGGGAAAAGTAGGATTAGGGATACGGTGATAGCACAAAATAGAATACTACTATTTTGGTATTGCACCACCTATCTTCTCCTCGAGAAAAACAAACCCAAATACCAGCAACTTGAAATCCCCATCGACGACATCGAAAACGACATCGACGACAACGAAAACGACATCGACGACAACACGTCACTTTTAAAACTTGAGGAGATCAATTCTGAAGAAGTTGATCAGACACTTGAAGCTCCGGCAGTCGTCCAAGTTGATTCCGACCAGCCCCCTGAGTCACCCGGAGTAGATCTTGTTGGCCCTTTTGTCCTCGAAGGTTTGTAA 2217 0.4542 MAGFGGKKVHQMIVGFGGSGFGQVAIAVAISFLVRVFSAPGPALSPENDPDDTLENGSDDAEAGATGKVTPVTISWRNINCSLSDKSSKSVRFLLRNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLTASPRLHLSGVLEFNGKPASKNAYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDEFVNTLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSMACELLASPSVIFSDEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIILLTEGSLVYAGPARDEPLAYFSKFGYQCPDHINPAEFLADLISIDYSSSDSVYTSRKRIDGLVESFSERLSGVIYATPITVNNLSNSRKKISQRAVAKKKGVWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLLSKLLAELPIGAAFPLMFGTVLYPMARLHPTLQRFGKFCGIITMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSCSLIRWAFQGVSINEFSGLQFDHQHSFDIQTGEQALERISFGKSRIRDTVIAQNRILLFWYCTTYLLLEKNKPKYQQLEIPIDDIENDIDDNENDIDDNTSLLKLEEINSEEVDQTLEAPAVVQVDSDQPPESPGVDLVGPFVLEGL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00562 738 Pfam ABC-2 type transporter 397 607 IPR013525 GO:0016020|GO:0140359
Phac7g00562 738 FunFam ABC transporter G family member 7 72 310 - -
Phac7g00562 738 Pfam ABC transporter 95 247 IPR003439 GO:0005524
Phac7g00562 738 Gene3D - 66 309 IPR027417 -
Phac7g00562 738 Pfam ABC-2 type transporter 277 335 IPR043926 GO:0140359
Phac7g00562 738 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Phac7g00562 738 MobiDBLite consensus disorder prediction 44 65 - -
Phac7g00562 738 CDD ABCG_EPDR 71 302 - -
Phac7g00562 738 SMART AAA_5 104 297 IPR003593 GO:0016887
Phac7g00562 738 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 306 IPR027417 -
Phac7g00562 738 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 64 622 - -
Phac7g00562 738 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00562 Phac-Chr7 3157860 3164836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00562 94 385 Calmodulin-binding Proteins AT2G36910 25.676 5.19e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00562 K05681 - gmx:100788256 1298.88