Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g00546 | ATGGGGGATCACTTTGAGTTACTGGTCGATCGATTGCTTACTGAATCCACATTAGAAGCTGCACTTGAAAGCAGGAATAAGTCTATGTTGGCTGCATCCTCAGCAGTGAATGACGCGAAAATTGATCTCAATTTGGTGAAGGTGGGTATGGATGATATAAAATTTCCGGGGAAGCTGGTAGAATGCAGGATATGTCATGATGACGATGAAGATACCAATATGGAGACACCCTGCTCCTGTTGTGGTAGTTTGAAGTTCGCTCACCGTAGATGTATACAACGATGGTGTAATGAGAAGGGTGACACTACCTGTGAGATATGCCACCAGCAATTCAGGCCTGGTTATACTGCTCCTCCACCGCTATTTCAATTTGGACGTATTCCAATGAGTTTCAGGGGGAATTGGGAGATTTCAAGAAGAGACTTGAATAGTACACATTTGGTTAGCATGGTCCCAACCGATCAAAACGTTACCACTTCTAACTATGATCAGTATTCAGCCTCTGCTACAGGAAGTTTGATTTGCTGTCGTTCAATTGCTGTCATTGTAACCTCCCTTGTCTCTGTTATGCATGTATGCCACTGTGCCCTTACTCCTACCTGTTGTGACATTTCCAATCTTTGTTTCTCTTGGGCAGTTCATGGTTCTTCTGATTTTAAGACACACACTCCCCCTTGTAATCAGTGGAAATAA | 693 | 0.4329 | MGDHFELLVDRLLTESTLEAALESRNKSMLAASSAVNDAKIDLNLVKVGMDDIKFPGKLVECRICHDDDEDTNMETPCSCCGSLKFAHRRCIQRWCNEKGDTTCEICHQQFRPGYTAPPPLFQFGRIPMSFRGNWEISRRDLNSTHLVSMVPTDQNVTTSNYDQYSASATGSLICCRSIAVIVTSLVSVMHVCHCALTPTCCDISNLCFSWAVHGSSDFKTHTPPCNQWK* | 231 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g00546 | 230 | SMART | ringv_2 | 61 | 108 | IPR011016 | GO:0008270 | |
Phac7g00546 | 230 | CDD | RING_CH-C4HC3_MARCH | 62 | 108 | - | - | |
Phac7g00546 | 230 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 56 | 116 | IPR013083 | - | |
Phac7g00546 | 230 | Pfam | RING-variant domain | 62 | 107 | IPR011016 | GO:0008270 | |
Phac7g00546 | 230 | SUPERFAMILY | RING/U-box | 61 | 112 | - | - | |
Phac7g00546 | 230 | Pfam | Protein of unknown function (DUF3675) | 113 | 193 | IPR022143 | - | |
Phac7g00546 | 230 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 1 | 200 | IPR033275 | - | |
Phac7g00546 | 230 | FunFam | Zinc finger family protein | 50 | 117 | - | - | |
Phac7g00546 | 230 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 54 | 114 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g00546 | Phac-Chr7 | 3096702 | 3100547 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g00546 | 61 | 112 | C3H Transcription Factor Family | AT2G37950 | 45.455 | 1.65e-07 | 48.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g00546 | - | - | vun:114190540 | 375.941 |