Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00495 ATGATAGATGAGTCAATTTCACTGATAAATCACGTTCCTAGCTTTGCAAGAGGTTTTACCATTCTGCTAGTACATGATGACAAATTTTCCCGTTCCTACCTATCAACAATTCTTCAGCTATATTCCTTCAAAGTTACTGCTACAAATAATGCATCCGCTGCTGCGTCCATGATTTGCCGTCAAGAAGGCATGTTCAAACTGATAATGGCTAAAGCTGATATGCCTGACATGGACATCCTTTCTTTTCTCGATGTAATACTCGAAAAGGACATTCCTGTCATCTTCATAAGTTCTGGAGTATTTGATGATGTAAATAGGAAAGCTTTAGCTACAGGATTGTGTTATTTCCTTCAGGAGCCAATCATTCCCAATGATCTTAAATATCTATGGCAACATGTGTATCACTCAAGAGCATATTCAGCCAAAAACACCCAAAATGCAGGCTCTCAGAGCATGGTGCTCCATGCAAAGGGATTGCAGAATACCCAGATGAAACAGTTGGCAAACACCCAATGGCAGGTTCTTGGAGCAAAAAGAGGAAGAAACGATGGTGATATATGGAGCCAGGAAAAAGGAAAGAGAACCCTTTGTGACTACACAATGCCAACCACACAGTGCATGATGGGTCGCAAAGCATATGGAAAAAGAAACCATGACGACTATGTGGGCAAGGGAAAAGAAAAGAGATATGTTGTGCACGAAAAGCCAGATTCACTGGGATCAACCAAGATAAACTTTAACAACCCCAATCAATATTTCAGAATGTTTCAGTCCAAAAACCGTTTCAGTGTTTGGACTCCTGAGTTGCATCAAAAGTTTACTGAAGCAGTGCAAGAATTAGGAGAGAACATTGCTCGTCCAAAACAGATATTACTGCGGATGAATGTTGGTGAGCCTTACCTCACTGTTCGCCAGGTTGCAAGTCATCTGCAGAAATACAGATTGCGGTTGAAATGTGAAGAGAACTCTCGCAATTCTAATTTGCCTAAAGTAAGAACATCATTATCCTCAAGACACAAAGCCAACTCTTCCTCGTCCGAAGGATCCACCTTTGAAACAAAAGGTCTCACAGCACCAGAGGTTTTGTTGAATGTGAAGCATAATGAAGATCAGATTCCAGTGAACAGCGTGGGAGTGGAATTGGCAGCTTCTTGGGATTCACAGCCAATGGGAGGTGCTTCAGTGGGTTTAAACATAGCGGGAACTGAGTTCCATGATTTCGTAAAAACGTTTCTGGAAGATTCTGACTGTTTTAGTTTGTATAAATATGAAACCGATCCTGCTGCTGTTGATCAATGCACTGAGATGCTAAGAAAAGTTCTAGAAGGAAGGGGTTCCTCTTAG 1344 0.4137 MIDESISLINHVPSFARGFTILLVHDDKFSRSYLSTILQLYSFKVTATNNASAAASMICRQEGMFKLIMAKADMPDMDILSFLDVILEKDIPVIFISSGVFDDVNRKALATGLCYFLQEPIIPNDLKYLWQHVYHSRAYSAKNTQNAGSQSMVLHAKGLQNTQMKQLANTQWQVLGAKRGRNDGDIWSQEKGKRTLCDYTMPTTQCMMGRKAYGKRNHDDYVGKGKEKRYVVHEKPDSLGSTKINFNNPNQYFRMFQSKNRFSVWTPELHQKFTEAVQELGENIARPKQILLRMNVGEPYLTVRQVASHLQKYRLRLKCEENSRNSNLPKVRTSLSSRHKANSSSSEGSTFETKGLTAPEVLLNVKHNEDQIPVNSVGVELAASWDSQPMGGASVGLNIAGTEFHDFVKTFLEDSDCFSLYKYETDPAAVDQCTEMLRKVLEGRGSS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00495 447 SMART REC_2 19 130 IPR001789 GO:0000160
Phac7g00495 447 Gene3D - 19 154 - -
Phac7g00495 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 265 318 IPR017930 -
Phac7g00495 447 SUPERFAMILY Homeodomain-like 259 318 IPR009057 -
Phac7g00495 447 Pfam Myb-like DNA-binding domain 264 314 IPR001005 -
Phac7g00495 447 FunFam Two-component response regulator 257 320 - -
Phac7g00495 447 Pfam Response regulator receiver domain 21 127 IPR001789 GO:0000160
Phac7g00495 447 MobiDBLite consensus disorder prediction 324 352 - -
Phac7g00495 447 PANTHER - 10 353 - -
Phac7g00495 447 Gene3D - 257 319 - -
Phac7g00495 447 SUPERFAMILY CheY-like 18 149 IPR011006 -
Phac7g00495 447 NCBIfam myb-like DNA-binding domain, SHAQKYF class 264 316 IPR006447 GO:0003677
Phac7g00495 447 MobiDBLite consensus disorder prediction 326 352 - -
Phac7g00495 447 ProSiteProfiles Response regulatory domain profile. 20 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00495 Phac-Chr7 2790723 2794827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00495 12 317 Response Regulator Gene Family AT1G68210 31.392 9.03e-31 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Phac7g00495 Response_reg 2.6e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00495 - - vun:114191433 624.78