Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00448 ATGTTTCTGAACACCCACGGTCATCTTGCAGCCAAAAGATACAGTTATTCAGAGATAAAGAAGGCCACGAACTCCTTCAGAAACAAATTGGGTGAAGGAGGGTATGGTAGCGTGTACAAGGGCAAGTTAAACGATGGAAGCCTTGTGGCAGTGAAAGTCTTAAGCGACTCCAAAGGTAACGGTGAGGAGTTCATCAATGAAGTTGCTAGCATCAGTCTTACTTCTCATGTTAACATTGTTAGTTTACTAGGATTCTGTCAGGAAGGTTCTAAAAGAGCTTTAATATACAAGTACATGCCTAATGGATCACTTGAGAAGTTCATATATGAAGACAAGGATCCACACAAGCTTAGTCTTCAATTAAGCTGCAAAACCATCTACAACATTGCAATTGGCATTGCTCGAGGTTTAGAGTATTTACACAGAGGTTGCAATACTAAAATCTTGCATTTTGATATCAAACCTCACAATATACTGATTGATGAGGATTTCTGTCCCAAAATTTCAGACTTTGGACTAGCTAAAATATGTCAGAAAAAGGAAAGTATTGTGTCCTTATTGGGAACTAGGGGAACTGCAGGATACATTGCTCCTGAGGTGTTCTCTAGAAATTTTGGAGGAGTCTCTCATAAATCTGATGTATATAGCTATGAAATGGTGGTTTTGGAAATGGTGGGGGGCAAGATGAATAATAATGTTGATGTTGAAGGTTCAAGCGAAATATATTTTCCAAACTGGGTTTACAAGCGTCTTGAGCTGAATGAGGAGCCTAGACTGCGAAGCATAAAAAGTGAAAGTGATAGAGAAATGATACGAAAGTTGATTATTGTGAGCTTATGGTGCATTCAGACAGACCCATCACATAGGCCAGGAATGAGTAGAGTGGTAGATATGATGGAAGGAAGCTTGGAGGTTTTGCAAATACCACCAAAACCTTATCTCTCTTCACCTCCCAGATCCCCTCCTAGCTCCTCAGATCACACCACCTACACCTCTCACACTACTTACCCTTCCGAATACTGA 1023 0.4037 MFLNTHGHLAAKRYSYSEIKKATNSFRNKLGEGGYGSVYKGKLNDGSLVAVKVLSDSKGNGEEFINEVASISLTSHVNIVSLLGFCQEGSKRALIYKYMPNGSLEKFIYEDKDPHKLSLQLSCKTIYNIAIGIARGLEYLHRGCNTKILHFDIKPHNILIDEDFCPKISDFGLAKICQKKESIVSLLGTRGTAGYIAPEVFSRNFGGVSHKSDVYSYEMVVLEMVGGKMNNNVDVEGSSEIYFPNWVYKRLELNEEPRLRSIKSESDREMIRKLIIVSLWCIQTDPSHRPGMSRVVDMMEGSLEVLQIPPKPYLSSPPRSPPSSSDHTTYTSHTTYPSEY* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00448 340 SMART serkin_6 24 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00448 340 MobiDBLite consensus disorder prediction 309 340 - -
Phac7g00448 340 ProSiteProfiles Protein kinase domain profile. 24 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00448 340 Gene3D Phosphorylase Kinase; domain 1 4 98 - -
Phac7g00448 340 MobiDBLite consensus disorder prediction 320 340 - -
Phac7g00448 340 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 323 IPR045874 GO:0004672
Phac7g00448 340 ProSitePatterns Protein kinases ATP-binding region signature. 30 52 IPR017441 GO:0005524
Phac7g00448 340 FunFam PR5-like receptor kinase 99 311 - -
Phac7g00448 340 PIRSF ILK 8 307 - -
Phac7g00448 340 Gene3D Transferase(Phosphotransferase) domain 1 99 307 - -
Phac7g00448 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Phac7g00448 340 Pfam Protein kinase domain 28 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00448 340 FunFam serine/threonine-protein kinase PBS1-like 3 98 - -
Phac7g00448 340 SUPERFAMILY Protein kinase-like (PK-like) 10 299 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00448 Phac-Chr7 2539059 2540081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00448 4 315 Receptor kinase-like Gene Family AT4G18250 59.688 4.74e-133 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac7g00448 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00448 - - vun:114191483 588.956