Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00447 ATGGCAGCAACACTCTCTCACCTTACTCCTCTTCTGCTTTTTCATTTTCTTCTTCTCACTGTTCAAGGTTCCAATAACCCAGATTTCGACGCTCTCGTGGCCTTCAAAACCGCTTCAGACGCTTCCCACAAGCTCACAACATGGAACACCAGCAGCACCAACCCCTGTTCCTGGAGCGGCGTGTCGTGCATTCGCGACCGCGTCTCGCGACTCGTTCTCGAAAACCTCGACCTCCAAGGCTCCATTCACCCCTTGACTTCTTTAACTCAGCTCCGAGTTCTCAGTCTCAAAGGAAACCGTTTCTCCGGTCCCGTTCCCAACCTCTCCAACCTCACCGCCCTCAAACTCCTCTTTTTGTCTCGCAACGCCTTCTCCGGCGAGTTTCCGGGCACCGCCACGTCGCTCTTCCGCCTCTACCGACTCGATCTGTCCAACAACAACTTCTCCGGCGAGATTCCGGCGACGGTCTCCCATCTGACCCACCTCCTCACTCTCCGCCTCGACGGGAACGAATTCTCTGGCCACATTCCCGACGTCAACCTCCCCGATCTCCAAGAATTCAACGTCTCCGGAAACCGCCTCTCCGGCGAGATACCCAAAGCATTATCAAGTTTCCCCGAATCCTCTTTCGGACAAAACCAGCTTCTCTGCGGTGCCCCAGTTAAAAAATGCGCATCCGACCCAACCAAACCCGGATCAGAAGGCGCCATTGCTTCGCCGTTGTTACCACATAATAACAACCCTACAACTACCGTATCATCTTCACCAAGTTCAATGCCAAAAACGTCAACACCAATGTCAAGTAGTAAAAGTCACGAGAAAGGTGCTTCTAAAATCGGCCCGGTGGCACTTATAGCTATTATAGTAGGTGATGTTTTGGTTCTTGCAATAGTGTCATTGCTATTGTATTGTTACTTCTGGAGAAACTACAAGTTAAAGGAGGGGAAAGGGTCGAAGCTTTTTGAGAGTGAGAAGATCGTGTATTCGTCGAGTCCGTACCCTGCTCAGGGAGGGTTTGAGAGGGGTCGCATGGTGTTCTTCGAGGGTGAGAAAAGGTTTGAACTTGAGGACTTGCTGCGAGCCTCTGCGGAAATGCTTGGAAAGGGAGGGTTTGGGACCGCGTACAAGGCAGTGCTCGATGATGGTAACGTGGTTGCGGTGAAGAGACTGAAGGACGCGCAGATTACAGGGAAGAGGGAGTTCGAGCAACACATGGAGGTGTTGGGAAGGTTAAGGCATCCAAATGTTGTTAGTTTGAGAGCTTACTATTTTGCGCGCGAGGAGAAGTTGCTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGGAACAGAGGACCCGGACGAACCCCACTGGACTGGACCACAAGGCTGAAGATAGCAGCGGGAGCCGCGAGAGGCGTGGCTTTCATTCATAACTCGTGCAAGTCCCTTAGACTCACCCACGGTAACATCAAATCCACCAACGTCTTACTCGACAAGCACGGCAACGCGCACGTGTCTGATTTTGGGCTCTCGGTTTTCGCGGGCCCAGGCCCATTGGGTGGGAGACCCAACGGCTACCGCGCGCCGGAGGCATCGGATGGTCGAAAACAGACCCAGAAGTCTGACGTGTACTCTTTCGGTGTGCTCCTGCTGGAGATGCTGACAGGAAAGTGCCCCTCCGTGGTGGAGAGTGCAGGCAGTGCTTACGGTGGGGTGGTGGACCTACCGAGGTGGGTCCAGTCAGTGGTGAGGGAGGAATGGACGGCTGAAGTGTTTGATTTGGAGCTGATGAGGTATAAGGATATTGAGGAGGAGATGGTGGGGCTGCTTCAGATTGCAATGACGTGTACCGCTGCTGCACCTGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATTGAGGAGTTGCGTGGGGTGGAGGTGTCGCCGTGTCATGACTCGACGGACTCTGTTTCGGAGTCACCTTCCATGTCTGAAGATGCGTGTGGTACGAGTCAGTGA 2001 0.5347 MAATLSHLTPLLLFHFLLLTVQGSNNPDFDALVAFKTASDASHKLTTWNTSSTNPCSWSGVSCIRDRVSRLVLENLDLQGSIHPLTSLTQLRVLSLKGNRFSGPVPNLSNLTALKLLFLSRNAFSGEFPGTATSLFRLYRLDLSNNNFSGEIPATVSHLTHLLTLRLDGNEFSGHIPDVNLPDLQEFNVSGNRLSGEIPKALSSFPESSFGQNQLLCGAPVKKCASDPTKPGSEGAIASPLLPHNNNPTTTVSSSPSSMPKTSTPMSSSKSHEKGASKIGPVALIAIIVGDVLVLAIVSLLLYCYFWRNYKLKEGKGSKLFESEKIVYSSSPYPAQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQITGKREFEQHMEVLGRLRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLTHGNIKSTNVLLDKHGNAHVSDFGLSVFAGPGPLGGRPNGYRAPEASDGRKQTQKSDVYSFGVLLLEMLTGKCPSVVESAGSAYGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMTCTAAAPDQRPRMSHVVKMIEELRGVEVSPCHDSTDSVSESPSMSEDACGTSQ* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00447 666 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 436 643 - -
Phac7g00447 666 Pfam Protein kinase domain 364 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00447 666 SUPERFAMILY L domain-like 37 219 - -
Phac7g00447 666 ProSiteProfiles Protein kinase domain profile. 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00447 666 MobiDBLite consensus disorder prediction 228 274 - -
Phac7g00447 666 MobiDBLite consensus disorder prediction 240 274 - -
Phac7g00447 666 FunFam Leucine-rich repeat receptor-like protein kinase 25 178 - -
Phac7g00447 666 MobiDBLite consensus disorder prediction 645 666 - -
Phac7g00447 666 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Phac7g00447 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 638 IPR046959 -
Phac7g00447 666 FunFam pollen receptor-like kinase 1 333 435 - -
Phac7g00447 666 CDD STKc_IRAK 366 636 - -
Phac7g00447 666 Gene3D Phosphorylase Kinase; domain 1 340 435 - -
Phac7g00447 666 SUPERFAMILY Protein kinase-like (PK-like) 364 633 IPR011009 -
Phac7g00447 666 MobiDBLite consensus disorder prediction 642 666 - -
Phac7g00447 666 Gene3D Ribonuclease Inhibitor 87 231 IPR032675 -
Phac7g00447 666 Gene3D Ribonuclease Inhibitor 21 86 IPR032675 -
Phac7g00447 666 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Phac7g00447 666 Gene3D Transferase(Phosphotransferase) domain 1 436 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00447 Phac-Chr7 2532312 2535830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00447 28 666 Receptor kinase-like Gene Family AT1G68400 67.884 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac7g00447 Pkinase 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00447 - - vum:124834036 1217.99