Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00432 ATGTCCACAATTGCAAAGAGAGATTTGAGTTCTAATGAGGAAGAGAGTGAGCTGAGAAGAGGACCTTGGACTCTTGAAGAAGATAGCCTACTCATTCACTATATTGCTCGTCATGGTGAAGGTCGGTGGAATATGTTAGCCAAGAGTGCAGGATTGAAGAGGACTGGAAAAAGCTGCAGACTCAGATGGCTGAATTATTTGAAACCAGACATTAAGAGAGGGAACCTCACTCCACAGGAGCAACTCTTGATCCTTGAACTCCACTCCAAGTGGGGTAACAGGTGGTCAAAGATTGCTCAGCATCTGCCAGGAAGAACAGACAATGAGATCAAGAATTATTGGAGAACAAGGGTACAGAAGCAGGCACGCCAACTAAACATTGAGTCTGGAAGTAAGAGATTCATTGATGCTGTGAAGTGTTTTTGGATGCCAAGGTTGATCCAAAAGATGGAACAGAACAATTCTCCAAGCCCTCACTCTTCCATGACAAGCATGATGAATTTGGGGAATTCTGGAGAAGCTTCTATGAGTTCAACGTCAAGCAGCTTCAATATTCCCTCTATGTTTTCATCATCTCCTCCACAAAGGGAATTTATTATGGATGGTGCAAATCATTTTAGTACCATGTCCAACCCCATCAATCCATCCCCAGATTCCTTCCCATTTTCACAGCTACTTGAAATTTCTGAACACCCCAAAAGTCCTCCAAATGTGCTTGAGAACAATGTTTACAGCTATCCAATCCAGGACAATTGTTATGCTGATACCAATAACTATGGCATGGAAGCCCTTAACATGGATCCCCTTTCAGCCTTGGGAACTTACGACTTCCCACAGTTTGATTTTCAGACCGCAGGAAATGGATGGATGTTTGACAGCGTGGAGGACACTACTTTATGGAACATGGATGCTATGTGA 918 0.4325 MSTIAKRDLSSNEEESELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLIQKMEQNNSPSPHSSMTSMMNLGNSGEASMSSTSSSFNIPSMFSSSPPQREFIMDGANHFSTMSNPINPSPDSFPFSQLLEISEHPKSPPNVLENNVYSYPIQDNCYADTNNYGMEALNMDPLSALGTYDFPQFDFQTAGNGWMFDSVEDTTLWNMDAM* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00432 305 Gene3D - 17 73 - -
Phac7g00432 305 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 187 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phac7g00432 305 MobiDBLite consensus disorder prediction 152 177 - -
Phac7g00432 305 MobiDBLite consensus disorder prediction 1 20 - -
Phac7g00432 305 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Phac7g00432 305 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Phac7g00432 305 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 35 44 IPR001345 GO:0003824
Phac7g00432 305 FunFam Myb transcription factor 20 72 - -
Phac7g00432 305 SMART sant 19 69 IPR001005 -
Phac7g00432 305 SMART sant 72 120 IPR001005 -
Phac7g00432 305 CDD SANT 77 116 IPR001005 -
Phac7g00432 305 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Phac7g00432 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Phac7g00432 305 CDD SANT 22 67 IPR001005 -
Phac7g00432 305 FunFam MYB transcription factor 77 140 - -
Phac7g00432 305 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
Phac7g00432 305 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Phac7g00432 305 Gene3D - 76 118 - -
Phac7g00432 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00432 Phac-Chr7 2372564 2374214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00432 15 204 MYB Transcription Factor Family AT1G68320 62.201 2.56e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g00432 Myb_DNA-binding 3.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00432 K09422 - gmx:100780759 544.658