Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00417 ATGAGACCAGAAGGAAACCCGTTAGATCTTAACAATTTGCCCGATGAGTACTCTAGAGATGGCAAACAAGTCCTCGAAGACCATACCTCTTCAACCGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTTAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACGGAGACACTGAACCAGGCTCGTCAACTGGTATTTCGTAGTGATCATAGCCTTGCTGCACAAGGTCCCCCTCACTTAGGATGCTGCCAACCGATAGGAAGCGGTGGTTATCATCCAACAGGAGATCCAACGGCACCACTAAGATTCCCGAGGTACTTCTCAGGTTCATCCTCAACTCACATGCCGCCACCAGCGCCGGCACCGGTAGCACCACAGCCATACCTGTATACCTCACCTACGAGGCCAGTGTCTTTTGGATCATCACACTTCCCTCACCAGCATGCGGTGAATGATTACTATGTGGGTCATGTGATGAGTGGGAGTCACGGACACTATGTGGGAGGAGGAGGAGGAGAGAGCACAAGCAGTTACACATGCATTGGTGCACCGGTGGGGCAAGGTGGCGGTGCTCCTGCTGTTAAGGACGGGTCACTGCATAATAATCAGGAGGAAGGGTTGAGTTGGGGAAGGGGCTATCGTTTGGATCCTCCCTCAGCGATCAATCGGTTTCAAGATGGTTTCTAA 762 0.5197 MRPEGNPLDLNNLPDEYSRDGKQVLEDHTSSTGCRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVFRSDHSLAAQGPPHLGCCQPIGSGGYHPTGDPTAPLRFPRYFSGSSSTHMPPPAPAPVAPQPYLYTSPTRPVSFGSSHFPHQHAVNDYYVGHVMSGSHGHYVGGGGGESTSSYTCIGAPVGQGGGAPAVKDGSLHNNQEEGLSWGRGYRLDPPSAINRFQDGF* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00417 253 SUPERFAMILY beta-beta-alpha zinc fingers 44 96 IPR036236 -
Phac7g00417 253 FunFam Zinc finger protein STAMENLESS 1 26 101 - -
Phac7g00417 253 MobiDBLite consensus disorder prediction 15 46 - -
Phac7g00417 253 Gene3D Classic Zinc Finger 28 102 - -
Phac7g00417 253 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Phac7g00417 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Phac7g00417 253 MobiDBLite consensus disorder prediction 1 46 - -
Phac7g00417 253 PANTHER ZINC FINGER PROTEIN JAGGED 20 231 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00417 Phac-Chr7 2262120 2264713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00417 4 213 C2H2 Transcription Factor Family AT1G13400 42.593 1.24e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g00417 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00417 - - aprc:113871902 390.193