Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00398 ATGGCTACCGATGCCCGTGACTCGCGTCACAAGCATCGCCGATCATCCTCACCGGAGGACGCGGACAGATCCTCGAAGCGCCACAAGCATCGCCACCACGGCCACCGCCATCGCCACCGCCACCGCCACGGCAGCAAAAAACGCGACGAAGATATTGAATTCGATGATCGAACCATTGCTGCTGTTCCTTCTCCAACTCCGCATAGACATCTCCCGGAGGACGATGTGGAGGAAGGAGAGATCCTCGATGACGAAGCTCTCGATAGCGAGGTTGGAAAGAAAGAGACGGAATCCGATGTCGAACCTGGTGAAATCAAGGCGACTGGAGATCGAGATGTTCAATCTGATGATCGAAATTCGGGACACCTCACTATAAATTCAGAAACTAACGAGGACATCGGTGTTGATAAATTTATTAGTCCTGCAACCAATGCAGATGATGGTGTATCTCTTAATCGTTCAATTGCTGAGACTCAAGATGGAAAGCATGCTACAGATGGTCTGGACAATGGTTATTTGAATTCTAAATCTTCCAGGGGGGATAAGTGGCGGAATGGGGAACTTGGACATTTTAAAGGGAATGAGAAACTAAAAGGTGACTTTGACAATGAAACACTGGAGGCTAATGTTAGAAAAACATATTTCCATAGGAATTCATCATCCGAAAGTGGAGGAGACAAGGGTAGAATATCAGGAAGTTCTCCTTCTCATGGCAGATATAGAAGTCGATCAAGGTCAATTGGTCATACAAGAGACAGGTCTCGTTCTCGTAGTGTCATAGATGAATATGTTCATTCCAAGAGAAGGCGCTCTGACTATGACTATGATGAGGAAAGAGTGAGGTCACGTGGAAGGGAACATGGTCATGGAAGTGTGGTAGATGATAGAAGGGAATACAGTAGCGGATATCACAATCGCGAGGCCCAGGATAGAGATAGGAGTAGGGATAGAGACTTGTACAGAGAAAAGAAACAAGAGGAAACAAGCAGGGGAAAGGACATTGAGTGGGACCGCAAAAGGGTTAAAGAACGCGAAAGGAGCCGTGAGAGGTATAGAAGGGATGTAGAAAAAGGTAGGAGCAGGGAAAGGGAGGATAGGGACAAGAGGCAAGAAAAGGAAAGAGATAGGAGCTGGGAGACAGTGTTTGAGAGGGATACGAGAAGGGAAAAGGAAAGAGATAGAAGTAGGGACAGAACAAGAGACTCTAAGAGAGATAGAGACCTGGAAAATGAAAGGGATGATAGGAATCGAGAGAGGGATATTAAGGAGAGGGAAAGACGAGATGATAGAGATGATAGATATAGGCACAAAGATAGAGACACTGCAAATGGTAAAGATAGGCGTGTGCGTCATGAAGATGGTAATGACAATGGTGATAGATATAGAAAACATTCTAGACATGAAGAAAATGATTACCATTGGGATAGAAAAAAAAATTATGGTAATCCAGTAAAGGTTCATACCTCGAGGGGAAGTACTGCAGAAGTGGATGAAAGCAAACCAATAGGTGAGGTTGAACCAGATGACTTAGAGGAAGATACATTGGATTTACCTGAGCAAGAAGAGGAAGATCTCAACAGGATCAAAGAAGAGAGTAGAAGAAGGAGGGAAGCAATAATGGAGAAATACAAGAGGCAGCATCAGGAAGTAGAAGTGGTTGGAAATGAACGAAATGACAAGGATACAGACACTCCAACTGAAATCTCTGAAGCGCATGACGTTAAGAATGATGATGCTAATTATGTGGAGCCGTCATTTGCTGTTGGGAAATCTCCTGAAAATGTGAATGCTGCTTCTCAGAAGATATCTCTTGCCGGAGGCCTGGGAGAGGGTACTCCAAAGAGTGAAAGGTCAGAGGACAAGTATTGTGATGATATATTTGGGGAGACACCAACTGGAGTTCGAAGATCAGGAAAAGGAGATGGTTTAATGATTGAAAGGGTTGGCCTACATGACAATTGGGATGATGCAGAGGGTTATTACAGCTACCGTATTGGTGAAATACTTGATGGCCGATATGAAGTCACTGCTGCACATGGGAGAGGTGTCTTTTCAACAGTTGTTCGGGCAAAGAATCTAAAGATGGGAAATGGTGAGCCAGAGGAAGTAGCAATAAAAATAATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAATTGGTCATATTGAAGAAACTAGTAGGTGCAGATCCAGATGATAAACGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTCCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATACGCAAAACAGCTTTTTATTGCCTTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAATATGTTGGTAAACGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGTTTTTATCGTGCCCCAGAAATAATACTTGGCTTGTCATATGATCATCCGTTGGATATTTGGTCTGTGGGCTGTTGTTTGTATGAGTTATATGTAGGTAAGGTTCTTTTCCCTGGGCTTACTAACAATGACATGCTACGACTTCACATGGAACTTAAGGGCCCTTTTCCAAAGAAGATGCTACGTAAGGGAGCATTTACTGAACAACATTTTGATCAGGACCTGAATTTTCTTGCAACTGAGGAAGATCCTGTGACAAAAAAGGCCATAAAGCGGCTGATTCTCAACATAAAGCCAAAAGATATTGGGACACTCATCACTGGCTCTCCCGGGGAGGATCCAAAAATGTTGGCCAACTTTAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGTTGACAGTGTCACAAGCTCTGAACCACCCATTCATCACTGGCAAGTGA 2976 0.4321 MATDARDSRHKHRRSSSPEDADRSSKRHKHRHHGHRHRHRHRHGSKKRDEDIEFDDRTIAAVPSPTPHRHLPEDDVEEGEILDDEALDSEVGKKETESDVEPGEIKATGDRDVQSDDRNSGHLTINSETNEDIGVDKFISPATNADDGVSLNRSIAETQDGKHATDGLDNGYLNSKSSRGDKWRNGELGHFKGNEKLKGDFDNETLEANVRKTYFHRNSSSESGGDKGRISGSSPSHGRYRSRSRSIGHTRDRSRSRSVIDEYVHSKRRRSDYDYDEERVRSRGREHGHGSVVDDRREYSSGYHNREAQDRDRSRDRDLYREKKQEETSRGKDIEWDRKRVKERERSRERYRRDVEKGRSREREDRDKRQEKERDRSWETVFERDTRREKERDRSRDRTRDSKRDRDLENERDDRNRERDIKERERRDDRDDRYRHKDRDTANGKDRRVRHEDGNDNGDRYRKHSRHEENDYHWDRKKNYGNPVKVHTSRGSTAEVDESKPIGEVEPDDLEEDTLDLPEQEEEDLNRIKEESRRRREAIMEKYKRQHQEVEVVGNERNDKDTDTPTEISEAHDVKNDDANYVEPSFAVGKSPENVNAASQKISLAGGLGEGTPKSERSEDKYCDDIFGETPTGVRRSGKGDGLMIERVGLHDNWDDAEGYYSYRIGEILDGRYEVTAAHGRGVFSTVVRAKNLKMGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLSYDHPLDIWSVGCCLYELYVGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKAIKRLILNIKPKDIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00398 991 CDD STKc_PRP4 672 988 IPR044092 GO:0004674|GO:0006468|GO:0045292
Phac7g00398 991 MobiDBLite consensus disorder prediction 245 482 - -
Phac7g00398 991 SMART serkin_6 673 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00398 991 Coils Coil 529 549 - -
Phac7g00398 991 FunFam serine/threonine-protein kinase PRP4 homolog 643 732 - -
Phac7g00398 991 Gene3D Phosphorylase Kinase; domain 1 643 732 - -
Phac7g00398 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Phac7g00398 991 Gene3D Transferase(Phosphotransferase) domain 1 733 989 - -
Phac7g00398 991 PANTHER DUAL SPECIFICITY PROTEIN KINASE 388 989 - -
Phac7g00398 991 MobiDBLite consensus disorder prediction 1 531 - -
Phac7g00398 991 SUPERFAMILY Protein kinase-like (PK-like) 660 990 IPR011009 -
Phac7g00398 991 MobiDBLite consensus disorder prediction 180 211 - -
Phac7g00398 991 MobiDBLite consensus disorder prediction 86 118 - -
Phac7g00398 991 Coils Coil 408 428 - -
Phac7g00398 991 ProSiteProfiles Protein kinase domain profile. 673 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00398 991 MobiDBLite consensus disorder prediction 504 520 - -
Phac7g00398 991 MobiDBLite consensus disorder prediction 26 45 - -
Phac7g00398 991 FunFam Serine/threonine-protein kinase PRP4 homolog 733 989 - -
Phac7g00398 991 Pfam Protein kinase domain 675 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g00398 991 MobiDBLite consensus disorder prediction 119 133 - -
Phac7g00398 991 MobiDBLite consensus disorder prediction 212 241 - -
Phac7g00398 991 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00398 Phac-Chr7 2048364 2056507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00398 626 990 MAP Kinase Gene Family AT2G18170 30.446 9.24e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Phac7g00398 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00398 K08827 - gmx:100776908 1551.95