Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00397 ATGAGTTGTTTTCATAACAAAAAACCAATCTTTTCCACTCTGGTTACATTATTACTCATTTCAATGACAAAACTCTTGCATTCTTATTTTTCCATACCCTTCTCAGCATTCAATGTTTCCATTTCTATTGCCACTGTTCTTTTTGTTCTAATCATATACAAATTTTTCTTAGCTTCTAAAACCCGCTCTTCCACTCCCCCAGGTCCTCTATCAGTTCCTATATTTGGTAACTGGTTGAAAGTTGGCAATGATCTCAACCACCGTGTTCTAGCGTCAATGTCACAAACCTATGGCCCTGTGTTTCTACTCAAACTAGGTTCCAAAAACTTGGTTGTGGTCTCTGACCCCGAGCTTGCCACCCAAGTGCTCCATTCACAAGGTGTGGAATTTGGGTCGCGCCCACGAAACGTTGTGTTTGATATCTTCACTGGAAACGGCCAAGACATGGTTTTTACTGTTTATGGTGAGCACTGGCGCAGAATGCGCAGAATCATGACGCTGCCATTCTTCACCAACAAGGTTGTCCACAACTACAGCAGCATGTGGGAGGAGGAGATGGAGTTGGTGGTGCGTGACCTCAAGCTGAATGAGAGAGTGAGGAGCGAAGGGATTGTTATCAGAAAGCGGCTTCAGTTGATGCTATACAATATCATGTATAGGATGATGTTTGACGCCAAGTTTGAGTCAGAAGAGGACCCTTTGTTCATTCAGGCCACGAGGTTTAACTCTGAGCGAAGCCGTTTGGCACAGAGTTTTGAATACAATTATGGAGATTTTATACCATTGCTCAGGCCATTCTTGAGGGGATACCTGAACAAGTGTAAGGACTTGCAATCTAGGAGGCTTGCATTTTTCAACACCCACTATGTTCAGAAAAGAAGACAAATAATGGCTGCCAATGGGGAGAAGCACAAGATCGGCTGTGCAATTGATCACATCATAGACGCTCAGATGAAGGGAGAAATCAGTGAAGAGAATGTGATATATATAGTAGAAAACATCAATGTTGCAGCAATTGAGACAACATTATGGTCCATGGAATGGGCAATAGCAGAGTTGGTGAATCATCCAAGCGTTCAAAGCAAGATACGTGATGAGATATCAGAAGTGCTTAAAGGGGAGCCAGTGACGGAATCCAACCTACACGAGCTACCATACTTACAAGCAACTGTGAAAGAAACACTGAGACTTCACACCCCAATTCCTCTTTTGGTGCCTCACATGAACCTGGAAGAAGCAAAGCTAGGAGGGTACACAATACCAAAAGAGTCCAAGGTGGTGGTAAATGCTTGGTGGCTTGCCAATAACCCATCATGGTGGAAGAATCCAGAGGAGTTTAGGCCAGAAAGGTTTTTGGAAGAGGAGTGTGCAACAGATGCTGTTGCAGGAGGAAAGGTTGATTTTAGGTTCGTGCCATTTGGTGTGGGAAGGAGGAGTTGCCCTGGAATCATACTTGCATTACCAATACTTGGACTTGTGATTGCAAAGCTGGTGTCAAATTTTGAGCTCAGTGCTCCACAAGGGACAAAGATAGATGTGAATGAAAAAGGAGGGCAATTCAGCTTGCACATTGCAAACTACTCCACTGTGTTGTTCCATCCAATTAGGACCCAATGA 1617 0.4372 MSCFHNKKPIFSTLVTLLLISMTKLLHSYFSIPFSAFNVSISIATVLFVLIIYKFFLASKTRSSTPPGPLSVPIFGNWLKVGNDLNHRVLASMSQTYGPVFLLKLGSKNLVVVSDPELATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGEHWRRMRRIMTLPFFTNKVVHNYSSMWEEEMELVVRDLKLNERVRSEGIVIRKRLQLMLYNIMYRMMFDAKFESEEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLAFFNTHYVQKRRQIMAANGEKHKIGCAIDHIIDAQMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPSVQSKIRDEISEVLKGEPVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPSWWKNPEEFRPERFLEEECATDAVAGGKVDFRFVPFGVGRRSCPGIILALPILGLVIAKLVSNFELSAPQGTKIDVNEKGGQFSLHIANYSTVLFHPIRTQ* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00397 538 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 44 535 - -
Phac7g00397 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Phac7g00397 538 Gene3D Cytochrome P450 57 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 FunFam Trans-cinnamate 4-monooxygenase 57 529 - -
Phac7g00397 538 SUPERFAMILY Cytochrome P450 66 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 Pfam Cytochrome P450 66 528 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 118 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac7g00397 538 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00397 Phac-Chr7 2041573 2044096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00397 75 534 Monolignol Biosynthesis Gene Families AT2G30490 65.659 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00397 K00487 - gmx:100812188 976.852