Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00381 ATGCTCCCCATCACCTGCATTCTTTTAATGTGCCTTCTAAGTTCTTTCTCCCCCCCAATTGAAGCTCTCCTCAACCTCACCGTACTACCCCACCAACACCCTCACCCCGAATCCATAGTCCACGAACTTCAACGGAAGGTAAATGTCTCGTTATGGAGAAGGCAAACACTGTCCAAGGACCAACAAGCCACGTGTCTCACCGGAAACCCCATCGACGACTGCTGGCGGTGCGACCCCAACTGGGGGGCAAACCGGCAGAAGCTGGCGGAGTGCGGCATCGGGTTCGGCAAAGACACCGTGGGCGGGAAGGGCGGGCAGATCTACGTGGTGACGGACTCGTCGGACCGCGACCCAGCCAACCCCGTTCCCGGCACGCTCCGGCACGCCGTCATCCAAGACGAGCCTCTCTGGATCGTGTTCGCCGCGGACATGACCATTAACCTCAAACACGAGCTCATCTTCAACAGCTACAAAACCGTCGACGGCCGCGGCGCCAACGTCCACGTGACGGGCCACGGCTGCATCACGCTCCAGTACGTCTCCGACGTCATCATCCACAACATCCACGTCCACCACTGCACGCCCTCAGGGAACACCAACATACGGGCCAGTCCAACGCACGTTGGGTGGAGGGGGAGATCGGACGGCGACGGCATCTCCATCTTCAGCTCCCGGAAGATCTGGATCGACCACTGCTCCCTCTCTTACTGCACGGACGGCCTGATCGACGCCATAATGGGCTCCACCGCGATTACCATTTCCAACAACCACTTCGCCCACCACGACGAGGTCATGCTCTTGGGACACAACGATAAGTACTCCCCCGACAGAGGCATGCAGGTCACCATTGCGTTCAACCACTTCGGCGAGGGTTTGGTTCAGCGCATGCCACGTTGCAGACTCGGCTACATCCACGTCGTCAACAACGATTTCACCCAGTGGGAGATGTACGCCATCGGCGGCAGCGCTAACCCCACCATCAACAGCCAGGGTAACCGTTACACCGCCCCCTCCAACCCTGATGCCAAAGAGGTGACGAAGCGCGTGGATACAGACGACAGGGAGTGGAGTGGTTGGAATTGGAGAACGGAAGGGGACGTAATGGTAAATGGAGCATTCTTTGTACCGTCGGGTGCAGGGATGAGTGCACAGTACGCAGAGGCCACCAGTGTGCAACCCAAATCCGCCGTGCAAATTGACCAGCTCACCATGTATTCCGGCGTCTTCGGTGATCCCAGGGATAATGGGGATCTGTATCCCGGTTTCAACGGTGGTGGGACCGTGACCGGAGCAACCAGCAAGGGCAACAGTGCGGGGTCCAGCAGTGACGATGGAGACTTCTTCGGAATGATATTCAGAGGAAGCAGCAGCCATGCAGCGCCACCGTCATCACCCTCTTCCTCCACTGTGTTTGTCACAACCTTTTTGTCTCTTCTAATTATTCTCATTTTGGACACTTCCACCACCAACCATCCCATTCTATGA 1485 0.5737 MLPITCILLMCLLSSFSPPIEALLNLTVLPHQHPHPESIVHELQRKVNVSLWRRQTLSKDQQATCLTGNPIDDCWRCDPNWGANRQKLAECGIGFGKDTVGGKGGQIYVVTDSSDRDPANPVPGTLRHAVIQDEPLWIVFAADMTINLKHELIFNSYKTVDGRGANVHVTGHGCITLQYVSDVIIHNIHVHHCTPSGNTNIRASPTHVGWRGRSDGDGISIFSSRKIWIDHCSLSYCTDGLIDAIMGSTAITISNNHFAHHDEVMLLGHNDKYSPDRGMQVTIAFNHFGEGLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPSNPDAKEVTKRVDTDDREWSGWNWRTEGDVMVNGAFFVPSGAGMSAQYAEATSVQPKSAVQIDQLTMYSGVFGDPRDNGDLYPGFNGGGTVTGATSKGNSAGSSSDDGDFFGMIFRGSSSHAAPPSSPSSSTVFVTTFLSLLIILILDTSTTNHPIL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00381 494 PANTHER PECTATE LYASE 18-RELATED 32 409 IPR045032 GO:0030570
Phac7g00381 494 Gene3D - 68 410 IPR012334 -
Phac7g00381 494 PRINTS Pollen allergen Amb family signature 151 167 IPR018082 -
Phac7g00381 494 PRINTS Pollen allergen Amb family signature 388 411 IPR018082 -
Phac7g00381 494 PRINTS Pollen allergen Amb family signature 359 383 IPR018082 -
Phac7g00381 494 PRINTS Pollen allergen Amb family signature 91 108 IPR018082 -
Phac7g00381 494 PRINTS Pollen allergen Amb family signature 115 140 IPR018082 -
Phac7g00381 494 PRINTS Pollen allergen Amb family signature 295 314 IPR018082 -
Phac7g00381 494 PRINTS Pollen allergen Amb family signature 317 336 IPR018082 -
Phac7g00381 494 PRINTS Pollen allergen Amb family signature 215 236 IPR018082 -
Phac7g00381 494 SMART amb_all 143 340 IPR002022 -
Phac7g00381 494 Pfam Pectate lyase 150 332 IPR002022 -
Phac7g00381 494 FunFam Pectate lyase 68 410 - -
Phac7g00381 494 SUPERFAMILY Pectin lyase-like 47 385 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00381 Phac-Chr7 1917380 1922301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00381 1 494 Polysaccharide Lyase AT3G53190 62.124 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00381 K01728 - gmx:100808438 876.7