Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00363 ATGGCTTCTCATCTTGGTCAAAGAAGTGCAACCATACCAATCCACTTTTTCAAGATTATTCTTGAAACTAATGTTGAAAGGATAAAACTACCCAACAAGTTCACAAAGAGATATGGGGGTTCTTTGCCAAATCCAGTGTCTCTTAGGGCTTCAGACTTCAAGGAATGGGTGGTGTATTGGACAGAAAAGAATGGTGAGGTTTGGTTTGAAAAGGGTTGGAAAGAGTTTGCTGAAAACTATTCCTTAAGTTATGGATATTTTGTGGTGTTCAAGTACAGAGGAACCTCCCAAATTGATGTACTCATACTTGATCAAAGTGCCCTAGAGTTAGATTATTTGTCTTCTGCTAATGGATCAGTTAACCCCGTGAATGCAACCGAGAAGGAGCAAAATGCAAGACCAATGCCATCATCAATGGTTGAAGAAACTCTGATGTGTAATATGGAAAGGGACTCCACTGTACAACGAGTGCATGCTGATAAGGGTGTTCCTTCTGATAAAGGGATGCATGTTCAACAATTAATCAGGTCACAATGTGTGAATCCAACTCAGAGTGGGAATTGTTTGAATCTGCCAAGAACACTAAAAGCTCGAAAAATAAGCAAAAGATTTAAATCAAAACATCCCTATTTCACTCTTGTGATAGAGCCTTCTAACTTAGAAGAAAATGCTTCGAAATATGTGCCCAAGTTTTTGGATAACATGAACTGCGAGAAGAATGTGGTGTTGCAGATGGCTAATAGTTCCTCGTATGCTTGGTATGTGAAGTTACTCAGTGGTGGTGACAGATATGATAGGTTCTGTTCTGGTTGGTCTATCTTTGCAAAAGAGAGTAAATTGGAAGTTGGTGACATTTGTATCTTTGAGTTGGTTGAACCTGCAGGTCCACTGCTTCGAGTTCATGTTTTCAGAAGCTAG 918 0.3954 MASHLGQRSATIPIHFFKIILETNVERIKLPNKFTKRYGGSLPNPVSLRASDFKEWVVYWTEKNGEVWFEKGWKEFAENYSLSYGYFVVFKYRGTSQIDVLILDQSALELDYLSSANGSVNPVNATEKEQNARPMPSSMVEETLMCNMERDSTVQRVHADKGVPSDKGMHVQQLIRSQCVNPTQSGNCLNLPRTLKARKISKRFKSKHPYFTLVIEPSNLEENASKYVPKFLDNMNCEKNVVLQMANSSSYAWYVKLLSGGDRYDRFCSGWSIFAKESKLEVGDICIFELVEPAGPLLRVHVFRS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00363 305 CDD B3_DNA 15 104 IPR003340 GO:0003677
Phac7g00363 305 PANTHER B3 DOMAIN-CONTAINING 14 293 - -
Phac7g00363 305 SUPERFAMILY DNA-binding pseudobarrel domain 204 304 IPR015300 -
Phac7g00363 305 SUPERFAMILY DNA-binding pseudobarrel domain 14 112 IPR015300 -
Phac7g00363 305 Gene3D - 11 107 IPR015300 -
Phac7g00363 305 SMART B3_2 210 305 IPR003340 GO:0003677
Phac7g00363 305 SMART B3_2 16 106 IPR003340 GO:0003677
Phac7g00363 305 CDD B3_DNA 209 304 IPR003340 GO:0003677
Phac7g00363 305 ProSiteProfiles B3 DNA-binding domain profile. 13 106 IPR003340 GO:0003677
Phac7g00363 305 Gene3D - 190 305 IPR015300 -
Phac7g00363 305 Pfam B3 DNA binding domain 216 304 IPR003340 GO:0003677
Phac7g00363 305 Pfam B3 DNA binding domain 26 97 IPR003340 GO:0003677
Phac7g00363 305 ProSiteProfiles B3 DNA-binding domain profile. 211 305 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00363 Phac-Chr7 1726142 1727847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00363 16 304 B3 DNA Binding Superfamily AT3G18990 25.816 7.00e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac7g00363 B3 2.5e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00363 - - pvu:PHAVU_007G022900g 468.388