Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00362 ATGGCTTCTCATCTTGGTCAAAGAAGTGCAACCATACCAATCCACTTTTTCAAGATTATTCTTGAAACTAATGTTGAAAGGATAAAACTACCCAACAAGTTCACAAAGAGATATGGGGGTTCTTTGCCAAATCCAGTGTCTCTTAGGGCTTCAGACTTCAAGGAATGGGTGGTGTATTGGACAGAAAAGAATGGTGAGGTTTGGTTTGAAAAGGGTTGGAAAGAGTTTGCTGAAAACTATTCCTTAAGTTATGGATATTTTGTGGTGTTCAAGTACAGAGGAACCTCCCAAATTGATGTACTCATACTTGATCAAAGTGCCCTAGAGTTAGATTATTTGTCTTCTGCTAATGGATCAGTTAACCCCGTGAATGCAACCGAGAAGGAGCAAAATGCAAGACCAATGCCATCATCAATGAGTGGGAATTGTTTGAATCTGCCAAGAACACTAAAAGCTCGAAAAATAAGCAAAAGATTTAAATCAAAACATCCCTATTTCACTCTTGTGATAGAGCCTTCTAACTTAGAAGAAAATGCTTCGGTAAATCTTAATATGAAGTCATTGTTTGACCAGATTATTATAGGAATTATGAGTTTCTTTCTCACTGTTGTTTGTTGCTTTACACAGAAATATGTGCCCAAGTTTTTGGATAACATGAACTGCGAGAAGAATGTGGTGTTGCAGATGGCTAATAGTTCCTCGTATGCTTGGTATGTGAAGTTACTCAGTGGTGGTGACAGATATGATAGGTTCTGTTCTGGTTGGTCTATCTTTGCAAAAGAGAGTAAATTGGAAGTTGGTGACATTTGTATCTTTGAGTTGGTTGAACCTGCAGGTCCACTGCTTCGAGTTCATGTTTTCAGAAGCTAG 870 0.3828 MASHLGQRSATIPIHFFKIILETNVERIKLPNKFTKRYGGSLPNPVSLRASDFKEWVVYWTEKNGEVWFEKGWKEFAENYSLSYGYFVVFKYRGTSQIDVLILDQSALELDYLSSANGSVNPVNATEKEQNARPMPSSMSGNCLNLPRTLKARKISKRFKSKHPYFTLVIEPSNLEENASVNLNMKSLFDQIIIGIMSFFLTVVCCFTQKYVPKFLDNMNCEKNVVLQMANSSSYAWYVKLLSGGDRYDRFCSGWSIFAKESKLEVGDICIFELVEPAGPLLRVHVFRS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00362 289 Gene3D - 11 107 IPR015300 -
Phac7g00362 289 SUPERFAMILY DNA-binding pseudobarrel domain 198 288 IPR015300 -
Phac7g00362 289 CDD B3_DNA 15 104 IPR003340 GO:0003677
Phac7g00362 289 Gene3D - 136 289 IPR015300 -
Phac7g00362 289 ProSiteProfiles B3 DNA-binding domain profile. 225 289 IPR003340 GO:0003677
Phac7g00362 289 CDD B3_DNA 210 288 IPR003340 GO:0003677
Phac7g00362 289 PANTHER B3 DOMAIN-CONTAINING 14 277 - -
Phac7g00362 289 SMART B3_2 200 289 IPR003340 GO:0003677
Phac7g00362 289 SMART B3_2 16 106 IPR003340 GO:0003677
Phac7g00362 289 ProSiteProfiles B3 DNA-binding domain profile. 13 106 IPR003340 GO:0003677
Phac7g00362 289 SUPERFAMILY DNA-binding pseudobarrel domain 14 112 IPR015300 -
Phac7g00362 289 Pfam B3 DNA binding domain 26 97 IPR003340 GO:0003677
Phac7g00362 289 Pfam B3 DNA binding domain 218 288 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00362 Phac-Chr7 1726142 1727847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00362 16 116 B3 DNA Binding Superfamily AT3G18990 32.039 2.14e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac7g00362 B3 1.5e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00362 - - pvu:PHAVU_007G022900g 561.222