Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00356 ATGTGTCACAGTTGTTCGTTTTCTTTTCAACAGTTATCACTTTCAACGCTTGCTGTGATATGTGATTATTTGTGCTGGGTTCAAAAATTGAGAGCGATGGACACGTCAAATCCTGCTGTATTTGTAAATGCTCAGTTGATTCCCAACTTTGTAGGGAAGAGAATAAGAACAGTGGTTCAGGTGAATCAATGTGGTGGTGGGATTGCCACAGCAAAATCCACTGATGACTCTCAATTAACAATAAAAGGGTTGCCACAAGTCCCCATTATGAATTTTATTGAGGTCATTGGTATTGCGGAAAGTAGCAACTCTATTGATGCCGAAATATGGACTGACTTTGGCAAAACATTTGATACAAACTCTTTTAATCAGTTGTGCCAACTAGCAAATGGTGAATTCAAAGGCCTCTTTCTCTAG 417 0.3909 MCHSCSFSFQQLSLSTLAVICDYLCWVQKLRAMDTSNPAVFVNAQLIPNFVGKRIRTVVQVNQCGGGIATAKSTDDSQLTIKGLPQVPIMNFIEVIGIAESSNSIDAEIWTDFGKTFDTNSFNQLCQLANGEFKGLFL* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00356 138 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 31 138 - -
Phac7g00356 138 Gene3D - 33 138 IPR012340 -
Phac7g00356 138 Pfam Replication factor A protein 3 33 131 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Phac7g00356 138 CDD RPA3 38 137 - -
Phac7g00356 138 SUPERFAMILY Nucleic acid-binding proteins 38 137 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00356 Phac-Chr7 1713664 1715193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00356 33 138 Core DNA Replication Machinery Family AT4G18590 51.887 7.85e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00356 K10740 - gmx:100781484 196.052