Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00319 ATGGCTTCTCATTGTCCTGGGGGAGATGCCACCCTGCCAATCTACTTCTTCAAAGTTATTCTTAAAACTAATCTTGAAAGGCTTAAAATACCCAACAAGTTCAGTTGCAAATATGGAATTGGCTTGCCAAATCCCTTGTTCATGAAGCCTCCAGATGGAACAGAATGGAAAGTGAATTGGGCAAAAGACAAGGGTGAGATTTGGCTGGAAAAGGGTTGGAAAGAATTTGTGGAACATTATTCCCTAGACCAAGGACATTTTATTTTCTTTAAATATGAAGGAACTTCCCAGATTCATGTAATCATACTTGATCAAAGTGCACTAGAAATAGACTATCCTTGTGGCACTGGAGATGAAAATGACAACCTTGTTAAAACCGAGGAGGAATCCGACATGATTTTTGATGAAGGGCAAGATGTGAAGGATGAACAAATAAGGGGTGAGAGGTGTGGTGAAAGAACTTCATCTTTGAACAGACCTACGCAATCTAGAGCACGGGAAGTAGCAAGCAACTTCGTCTCATGCAATCCCTTTTTCACAGTTTTCATAAGACCTGCTCATGCAGCAACATATCGGCTGAGCCTACCAGATTTAAAAGGCATTATTGGGCAGAAGGAGAGGTATGCGGTGCTGGAGCTTGGAGAAAGATCGTGGAAAGTGAAGTTGATCGGTAATAATAGCAGCTATTTTTCACATCACAGGTTCACTGCTGGCTGGTACTTGTTTTTACGTGAGAGTGAATTGCAATCTGGAGACGTTTGTGTATTTGAACTCATCAGCAAAGAGGATTGTGTTTTCAAAGTTCATCTTTTCAAAAATCACACCTAA 828 0.4082 MASHCPGGDATLPIYFFKVILKTNLERLKIPNKFSCKYGIGLPNPLFMKPPDGTEWKVNWAKDKGEIWLEKGWKEFVEHYSLDQGHFIFFKYEGTSQIHVIILDQSALEIDYPCGTGDENDNLVKTEEESDMIFDEGQDVKDEQIRGERCGERTSSLNRPTQSRAREVASNFVSCNPFFTVFIRPAHAATYRLSLPDLKGIIGQKERYAVLELGERSWKVKLIGNNSSYFSHHRFTAGWYLFLRESELQSGDVCVFELISKEDCVFKVHLFKNHT* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00319 275 Gene3D - 13 107 IPR015300 -
Phac7g00319 275 Pfam B3 DNA binding domain 23 103 IPR003340 GO:0003677
Phac7g00319 275 Pfam B3 DNA binding domain 178 272 IPR003340 GO:0003677
Phac7g00319 275 CDD B3_DNA 15 104 IPR003340 GO:0003677
Phac7g00319 275 CDD B3_DNA 178 272 IPR003340 GO:0003677
Phac7g00319 275 ProSiteProfiles B3 DNA-binding domain profile. 178 274 IPR003340 GO:0003677
Phac7g00319 275 SUPERFAMILY DNA-binding pseudobarrel domain 175 273 IPR015300 -
Phac7g00319 275 SMART B3_2 16 106 IPR003340 GO:0003677
Phac7g00319 275 SMART B3_2 178 274 IPR003340 GO:0003677
Phac7g00319 275 SUPERFAMILY DNA-binding pseudobarrel domain 14 113 IPR015300 -
Phac7g00319 275 PANTHER B3 DOMAIN-CONTAINING 15 266 - -
Phac7g00319 275 Gene3D - 158 274 IPR015300 -
Phac7g00319 275 ProSiteProfiles B3 DNA-binding domain profile. 13 106 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00319 Phac-Chr7 1474434 1476415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00319 16 129 B3 DNA Binding Superfamily AT1G49475 37.931 6.47e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac7g00319 B3 2.5e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00319 - - var:108325495 382.104