Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00318 ATGGATGCTGAGGTTTGGTTAATTGATGAATGGAAGAAATTTGCAGAATTCTTTTCTTTGGATCAGAACCATCTTCTGGTGTTTAGGTATGTGGGAAAGTCACAGTTCAAGGTTGTGATACTTGATCATGATGGCTTGGAGATAGTGTATCCTTTGATGGAAGGATCTTCAGATGGTGCAGATAATGGTAGCTCTTTTCGTCAGTGTAAGAGAGCAAGATTTTCTGTACCATCTTCTCCTTCTACCAAGAAAGTGAAAATCCACCCAAGGAAGAACCCTAATAGCTATCCAACACAAGATGTTGAAACTAAACATGCTGAATCTGTGAAAATCTACCCAAGGAAGAAATCTAACAGCTATCCAACACAAGATGTTGAAACTAAATATGCTGAATCAAAAAGGACTAAAGTTGACAATGTTGATGAAAAAGGTGGAAGAAGAAACAGGAGATGTTCAAGATCTAAGGTTAAGACTGAAAGTGGCACTGCTTTAGAGAGAGCCAAGTCTTTCATCTCAGAGAATCCCTTCTTCATTCGTGTAATGCAACGATCATACATCATTAGGAAATTCCTGGCTATGCCAGCTGATTTCATAACAGTTGAGGAACGAAGGGGAAACCATAGAGTTAGTCTTTGGATTTCTGAAGACAGAAGTTGGGATATGAACTTCCATGTTTATAGAAGCAGGAACGAAGTGACACTAGGTTCTGGTTGGGCTGATTTTGTGAAGGACAATGACTTGAAAAAAGGAAATGTATGTGTGTTTGAAAAAATTAAGAATCCAGGAATTTCATTTAGAGTTGTTATTTACCGTGATCCACAAGAATCTAGTCCTTCCAACTTCTCAGCAAATGAAAGCAAAGAAACTAGGCCTCAAAAGAGTTCTGCTGACAGAGGCAGTGATGGAGTTCCAAAGAATGTTTTTTATGGATTTCGTAGATGCAACAATGAAATCTCAGAGAATCACTTTGCCCTCAGTGTGCTAAAGACTGTGTGCATACCAGAGCAATTAATCAGAAATCATATGATGCAGAATGCAGCTAAGGTTGGTCTGAGAGTAGGGAATAGAACATGGCCTGTGAAGCTAGAACATTATCCAGAGAATCAATGTCACAAATTATGTTATTCTGGTTGGTCCAAGTTCATGCGTGAATGTAAAGTGAATGTTGGTGATGTCTGTAATTTTGAACTGGTTGATAAGGACAAGTTTATTTTCCAAGTTAGAGTTGCAAGGTGCATAGATTGA 1245 0.3847 MDAEVWLIDEWKKFAEFFSLDQNHLLVFRYVGKSQFKVVILDHDGLEIVYPLMEGSSDGADNGSSFRQCKRARFSVPSSPSTKKVKIHPRKNPNSYPTQDVETKHAESVKIYPRKKSNSYPTQDVETKYAESKRTKVDNVDEKGGRRNRRCSRSKVKTESGTALERAKSFISENPFFIRVMQRSYIIRKFLAMPADFITVEERRGNHRVSLWISEDRSWDMNFHVYRSRNEVTLGSGWADFVKDNDLKKGNVCVFEKIKNPGISFRVVIYRDPQESSPSNFSANESKETRPQKSSADRGSDGVPKNVFYGFRRCNNEISENHFALSVLKTVCIPEQLIRNHMMQNAAKVGLRVGNRTWPVKLEHYPENQCHKLCYSGWSKFMRECKVNVGDVCNFELVDKDKFIFQVRVARCID* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00318 414 ProSiteProfiles B3 DNA-binding domain profile. 333 411 IPR003340 GO:0003677
Phac7g00318 414 MobiDBLite consensus disorder prediction 73 158 - -
Phac7g00318 414 Gene3D - 156 273 IPR015300 -
Phac7g00318 414 Gene3D - 304 414 IPR015300 -
Phac7g00318 414 PANTHER B3 DOMAIN-CONTAINING 170 405 - -
Phac7g00318 414 CDD B3_DNA 325 408 IPR003340 GO:0003677
Phac7g00318 414 Gene3D - 2 45 IPR015300 -
Phac7g00318 414 ProSiteProfiles B3 DNA-binding domain profile. 176 273 IPR003340 GO:0003677
Phac7g00318 414 MobiDBLite consensus disorder prediction 274 301 - -
Phac7g00318 414 MobiDBLite consensus disorder prediction 274 289 - -
Phac7g00318 414 Pfam B3 DNA binding domain 330 408 IPR003340 GO:0003677
Phac7g00318 414 Pfam B3 DNA binding domain 177 271 IPR003340 GO:0003677
Phac7g00318 414 CDD B3_DNA 175 271 IPR003340 GO:0003677
Phac7g00318 414 SUPERFAMILY DNA-binding pseudobarrel domain 5 51 IPR015300 -
Phac7g00318 414 SUPERFAMILY DNA-binding pseudobarrel domain 172 271 IPR015300 -
Phac7g00318 414 SUPERFAMILY DNA-binding pseudobarrel domain 330 413 IPR015300 -
Phac7g00318 414 MobiDBLite consensus disorder prediction 127 158 - -
Phac7g00318 414 SMART B3_2 177 273 IPR003340 GO:0003677
Phac7g00318 414 SMART B3_2 323 411 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00318 Phac-Chr7 1466560 1470730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00318 2 271 B3 DNA Binding Superfamily AT3G18990 25.517 3.68e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac7g00318 B3 1.3e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00318 - - pvu:PHAVU_007G019500g 595.504