Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00317 ATGGATGCTGAGGTTTGGTTAATTGATGAATGGAAGAAATTTGCAGAATTCTTTTCTTTGGATCAGAACCATCTTCTGGTGTTTAGGTATGTGGGAAAGTCACAGTTCAAGGTTGTGATACTTGATCATGATGGCTTGGAGATAGTGTATCCTTTGATGGAAGGATCTTCAGATGGTGCAGATAATGGTAGCTCTTTTCGTCAGTGTAAGAGAGCAAGATTTTCTGTACCATCTTCTCCTTCTACCAAGAAAGTGAAAATCCACCCAAGGAAGAACCCTAATAGCTATCCAACACAAGATGTTGAAACTAAACATGCTGAATCTGTGAAAATCTACCCAAGGAAGAAATCTAACAGCTATCCAACACAAGATGTTGAAACTAAATATGCTGAATCAAAAAGGACTAAAGTTGACAATGTTGATGAAAAAGGTGGAAGAAGAAACAGGAGATGTTCAAGATCTAAGGTTAAGACTGAAAGTGGCACTGCTTTAGAGAGAGCCAAGTCTTTCATCTCAGAGAATCCCTTCTTCATTCGTGTAATGCAACGATCATACATCATTAGGAAATTCCTGGCTATGCCAGCTGATTTCATAACAGTTGAGGAACGAAGGGGAAACCATAGAGTTAGTCTTTGGATTTCTGAAGACAGAAGTTGGGATATGAACTTCCATGTTTATAGAAGCAGGAACGAAGTGACACTAGGTTCTGGTTGGGCTGATTTTGTGAAGGACAATGACTTGAAAAAAGGAAATGTATGTGTGTTTGAAAAAATTAAGAATCCAGGAATTTCATTTAGAGTTGTTATTTACCGTGATCCACAAGAATCTAGTCCTTCCAACTTCTCAGCAAATGAAAGCAAAGAAACTAGGCCTCAAAAGAGTTCTGCTGACAGAGGCAGTGATGGAGTTCCAAAGAATGTTTTTTATGGTACCCTTATATTCTTCTTGTCTGTTTTTCATTGCAGACATGTTTCTCTAATGATGTTTATTTAG 993 0.3797 MDAEVWLIDEWKKFAEFFSLDQNHLLVFRYVGKSQFKVVILDHDGLEIVYPLMEGSSDGADNGSSFRQCKRARFSVPSSPSTKKVKIHPRKNPNSYPTQDVETKHAESVKIYPRKKSNSYPTQDVETKYAESKRTKVDNVDEKGGRRNRRCSRSKVKTESGTALERAKSFISENPFFIRVMQRSYIIRKFLAMPADFITVEERRGNHRVSLWISEDRSWDMNFHVYRSRNEVTLGSGWADFVKDNDLKKGNVCVFEKIKNPGISFRVVIYRDPQESSPSNFSANESKETRPQKSSADRGSDGVPKNVFYGTLIFFLSVFHCRHVSLMMFI* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00317 330 MobiDBLite consensus disorder prediction 274 300 - -
Phac7g00317 330 Pfam B3 DNA binding domain 177 271 IPR003340 GO:0003677
Phac7g00317 330 Gene3D - 2 45 IPR015300 -
Phac7g00317 330 SUPERFAMILY DNA-binding pseudobarrel domain 5 51 IPR015300 -
Phac7g00317 330 Gene3D - 156 273 IPR015300 -
Phac7g00317 330 ProSiteProfiles B3 DNA-binding domain profile. 176 273 IPR003340 GO:0003677
Phac7g00317 330 SUPERFAMILY DNA-binding pseudobarrel domain 172 271 IPR015300 -
Phac7g00317 330 MobiDBLite consensus disorder prediction 274 289 - -
Phac7g00317 330 CDD B3_DNA 175 271 IPR003340 GO:0003677
Phac7g00317 330 SMART B3_2 177 273 IPR003340 GO:0003677
Phac7g00317 330 MobiDBLite consensus disorder prediction 72 158 - -
Phac7g00317 330 MobiDBLite consensus disorder prediction 127 158 - -
Phac7g00317 330 PANTHER B3 DOMAIN-CONTAINING 171 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00317 Phac-Chr7 1466560 1470730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00317 2 271 B3 DNA Binding Superfamily AT3G18990 25.517 2.82e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac7g00317 B3 8.4e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00317 - - pvu:PHAVU_007G019500g 385.571