Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00315 ATGTCTTCTGGTGATGATAGTGGCATTCACTTCTTCAAGAGGATTGAGGAAGACACACTTAGAAATGGAGATCTGAGAATGCCTAGAAGTTTTGTGAGTAAATATTGGGAAGATATATCAAATCCACTGCTCTTTCTGCTTCCCAAAGGTGGTGAATGGAAAGTGAAATGGAAAAAAACTGGTGTTGACATTTGGTTGATTGAAAACTGGAAGAAATTTGTAGAGTTTTATTCTTTGGACCAAGATAATCTCTTGATCTTCAAATATGTGGGTATGTCTCAGTTTGAGGTGGTGATACTTGATCAAAGTGGCTTGGAAATTATGTACCCTTTATTGGAAGCAAAGTTAGATGATGCAGAGAATGGTACCTGTTCATGCAAGTTTAAGAAGGCAGAATCTTCTTTACCAGGTTCTCATTTCTCCAAGAAGGTGGAAGCCAACAACAGAAGAAACCAACCTGATATCACTCCAGATGTTGAAAATATGAGAGCTCAATCTCAAAGATTCAAGGTTGATTGTCATGGTACAAAACTTGAAACAAGAGGTAGAAAAAGAAAAACTTTTTCCTGTATGAAATCTTCAAACTCTCAGGGAAAAGCTATTCCAACTAAAAGTGGCACTGCTTGGGAGAGAGCCCAATCTTTCCACTCTGAGAATCGCTTCTTCATTCGTGAAATGTATCCATCATATATTCAAAGAAATGTTATGGTGATGCCAGATAATGTCATAACAAAAGAAGAGGAGCATGAGACTGACAATGTTACTCTTTGGACATATGAAGAAGACAGACATTGGCTTGTTCATTTTTATAGGAATAATGCCAGTGGTCAAATAAATCTTACTTCTGGTTGGAATCATTTTGCAAAAGATCATAACTTGCTATTAGGGGATGTTTGTGTTTTTGAGAAAATTAAGAAATCTGGAATTTCATTCAGAGTTCATATTTATAGGAACAAACAAGAACCAAGTTCTCCTAAGTTTTCAGATTATGAAACTCCTAAATGCAACAACGTGGTAGTAGAGAACCACTTCAGTGTCAGCATCAATGATAAACAACTCTATACTGTGAGTGTTCCAAGGATTTTCTTCAAGAATCATGGTATTGCTAAAGCAACTGAAGTGACCCTGCAACTTGGGGAGAGATCATGGAATGTGAAGCTAGACTCTTACAGTAGATTGACTACGGGTTGGAATGATTTTATGAGAGAATGCAAATTGAAGGGTGGAGATGTTTGTGTGTTAGAGTTGATTGATAAGAAAAAGATTGTGTTTGAAGTTAGCATTCTAGCATGCATAGAGTGA 1302 0.3679 MSSGDDSGIHFFKRIEEDTLRNGDLRMPRSFVSKYWEDISNPLLFLLPKGGEWKVKWKKTGVDIWLIENWKKFVEFYSLDQDNLLIFKYVGMSQFEVVILDQSGLEIMYPLLEAKLDDAENGTCSCKFKKAESSLPGSHFSKKVEANNRRNQPDITPDVENMRAQSQRFKVDCHGTKLETRGRKRKTFSCMKSSNSQGKAIPTKSGTAWERAQSFHSENRFFIREMYPSYIQRNVMVMPDNVITKEEEHETDNVTLWTYEEDRHWLVHFYRNNASGQINLTSGWNHFAKDHNLLLGDVCVFEKIKKSGISFRVHIYRNKQEPSSPKFSDYETPKCNNVVVENHFSVSINDKQLYTVSVPRIFFKNHGIAKATEVTLQLGERSWNVKLDSYSRLTTGWNDFMRECKLKGGDVCVLELIDKKKIVFEVSILACIE* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00315 433 CDD B3_DNA 220 317 IPR003340 GO:0003677
Phac7g00315 433 SUPERFAMILY DNA-binding pseudobarrel domain 8 110 IPR015300 -
Phac7g00315 433 SMART B3_2 344 432 IPR003340 GO:0003677
Phac7g00315 433 SMART B3_2 11 103 IPR003340 GO:0003677
Phac7g00315 433 SMART B3_2 222 319 IPR003340 GO:0003677
Phac7g00315 433 Gene3D - 331 433 IPR015300 -
Phac7g00315 433 Gene3D - 202 320 IPR015300 -
Phac7g00315 433 ProSiteProfiles B3 DNA-binding domain profile. 341 432 IPR003340 GO:0003677
Phac7g00315 433 PANTHER B3 DOMAIN-CONTAINING 238 424 - -
Phac7g00315 433 Pfam B3 DNA binding domain 12 100 IPR003340 GO:0003677
Phac7g00315 433 Pfam B3 DNA binding domain 222 318 IPR003340 GO:0003677
Phac7g00315 433 Pfam B3 DNA binding domain 353 422 IPR003340 GO:0003677
Phac7g00315 433 SUPERFAMILY DNA-binding pseudobarrel domain 215 318 IPR015300 -
Phac7g00315 433 CDD B3_DNA 10 101 IPR003340 GO:0003677
Phac7g00315 433 ProSiteProfiles B3 DNA-binding domain profile. 10 103 IPR003340 GO:0003677
Phac7g00315 433 Gene3D - 3 104 IPR015300 -
Phac7g00315 433 CDD B3_DNA 353 429 IPR003340 GO:0003677
Phac7g00315 433 SUPERFAMILY DNA-binding pseudobarrel domain 353 429 IPR015300 -
Phac7g00315 433 ProSiteProfiles B3 DNA-binding domain profile. 221 319 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00315 Phac-Chr7 1462740 1464819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00315 11 317 B3 DNA Binding Superfamily AT3G18990 26.113 1.82e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac7g00315 B3 3.2e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00315 - - pvu:PHAVU_007G019400g 732.635