Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00310 ATGTCAATTCGATATCTGAGGAACTTTCTTGATTGGTTTGGTACCTGGCTTGTGTCGGGTAGCAAGAGGTTCTCAGCATCAATTGGCACTTTTGCAGGTGACATGAACATCATCATGCAAACTTTGGTGGAAAGACTAAGATCCCTGGTGGGTTTGAACGGATGGGACTATTGTATCTACTGGAAATTGAGTGAAGACGAAAGGTTTCTGGAGTGGTCAGGTTGCTGTTGTGGTGGCACTGAAAGCAGCCAAAATGGTGGAGAAGAACATCTTTTTCCTGTCTCTTCTGTGGTTTCATGCAGAGACACCACTTATCCACACCCCAGAACAAAGTCCTGTGATCTTCTTTCACAACTTTCCACTTCCATACCCATAGATAATTCTGGGATTCATACACAGACCCTATTATCAAACCAACACAGTTGGGTGAACTATTCCAATAGCTTGGATCCTAGCATTTTGGATGAAACAATGGGGACCCAGGTTTTGATTTCAGCACCAGGTGGACTAGTTGAGCTGTTTGTAACCAAACAAGTGCATGAAGACCATGAAGTGATAGATTTTGTGACAAGCCAGTGCATTGAAGCGGTGAACCACTCAATGAGCTACATTGAGAACTTGCAGCCAAACGCACTTTTAGGCGATGAAAACGAAGGAAACAATAGCAGGAACACTCACTTCCACCCTTCAGAACATGTGATGACTATGTGCAGTTCTCCACTGAACTTGATGCAGCAGTTCAACTACAAGCAGCAGAACAGAGTGAAGAGCGATGGGTTTTCCGAAGAGGAGCATGAGACGTATCAGAAAAGCCTGACAAGAGCAGAGTGTTTGGAGGCAAAAGAGAAGCAGCAGGAGGAGGAGAAGGAGTTGGTGAAAGGTCGATCGGATTCAATGTCGGATTGCAGTGAGCAGAACGAGGAAGAGGAAGAGGGAAAGTACAGGAGGAGGAATGGGAAAGGGAACCAGTCGAAGAACCTTATGGCTGAGAGGAAGAGAAGGAAGAAGCTGAATGACAGGTTATACAAGCTTCGTTCTTTGGTTCCACGGATCTCTAAGTTGGATAGGGCCTCTATCCTTGGAGATGCCATTGAATATGTAAAGGATTTGCAGAAGCAAGTGAAGGAACTTCAAGATGAGCTTGAGGAGAATGCAGACACCGAAAGCAACTGCATCACTATAGGTGAACTGTGTCAAAATCCTGAACATGCTAAGTCCCAATCTGGGTTGCATGTGGGGACATCAGGGAATGGCTATGTCTCCAAACAAAAGCAGGAAGATGCAGCTCTCATTGACAAGCAAACCCAGCAGATGGAGCCGCAAGTGGAAGTGGGTCTGATAGATGGGAATGAGTATTTTGTGAAGGTATTCTGTGAACACAGGCCTGGTGGGTTTGTGAGATTGATGGAGTCTTTGAACACTATTGGCATGGATGTAGTGCATGCCACCGTAACAAGCCACAAGGGCCTCGTTTCAAATGTTTTTGAAGTGGAGGTAACTTATATGCTTTCTTGTATCAAGAATGTTATTTTTACTCAATCTCGTAAAGTTGGTTTATGA 1560 0.4474 MSIRYLRNFLDWFGTWLVSGSKRFSASIGTFAGDMNIIMQTLVERLRSLVGLNGWDYCIYWKLSEDERFLEWSGCCCGGTESSQNGGEEHLFPVSSVVSCRDTTYPHPRTKSCDLLSQLSTSIPIDNSGIHTQTLLSNQHSWVNYSNSLDPSILDETMGTQVLISAPGGLVELFVTKQVHEDHEVIDFVTSQCIEAVNHSMSYIENLQPNALLGDENEGNNSRNTHFHPSEHVMTMCSSPLNLMQQFNYKQQNRVKSDGFSEEEHETYQKSLTRAECLEAKEKQQEEEKELVKGRSDSMSDCSEQNEEEEEGKYRRRNGKGNQSKNLMAERKRRKKLNDRLYKLRSLVPRISKLDRASILGDAIEYVKDLQKQVKELQDELEENADTESNCITIGELCQNPEHAKSQSGLHVGTSGNGYVSKQKQEDAALIDKQTQQMEPQVEVGLIDGNEYFVKVFCEHRPGGFVRLMESLNTIGMDVVHATVTSHKGLVSNVFEVEVTYMLSCIKNVIFTQSRKVGL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00310 519 Gene3D - 308 386 IPR036638 GO:0046983
Phac7g00310 519 SMART finulus 327 376 IPR011598 GO:0046983
Phac7g00310 519 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 177 499 - -
Phac7g00310 519 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 43 191 IPR025610 -
Phac7g00310 519 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 323 384 IPR036638 GO:0046983
Phac7g00310 519 MobiDBLite consensus disorder prediction 281 332 - -
Phac7g00310 519 CDD bHLH_AtAMS_like 324 389 - -
Phac7g00310 519 MobiDBLite consensus disorder prediction 281 318 - -
Phac7g00310 519 Coils Coil 360 390 - -
Phac7g00310 519 CDD ACT_UUR-ACR-like 454 497 - -
Phac7g00310 519 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 370 IPR011598 GO:0046983
Phac7g00310 519 Coils Coil 268 295 - -
Phac7g00310 519 Pfam Helix-loop-helix DNA-binding domain 326 371 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00310 Phac-Chr7 1436777 1440101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00310 39 498 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 45.473 2.16e-125 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g00310 bHLH-MYC_N 2.4e-20 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00310 - - gmx:100798282 724.931