Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00258 ATGCAATCTATCAGGAAGTCTTTCAAATCTTATGGTTCGTTCAAACAGTCAAAAAGGTTTTCCGGCGCCGGAAACCACGATTCCGACCACGAGCAGCTGCCTATTCTCCTCGACCAAGAATCGCACCGCCACAGCGCAATGCCCGCCGGCGACTATGTCGTCAAAATAGACGACGGCGCCAACCCCCCGCAGGGCAACAGGATTTGGCGCGAGTCGAGCTACGAGTTTTGGAAGGGCGAAAGCTCCTCCTCCGCCGCCGCCGCGAACGACCAGAGTTTTGATTTTCGGCAGACGGAGGACCCGCCGTCGCAGCTGATAGGGCGGTTCCTCCACAAGCAGCGGGCCTCCGGCGAGATGCAGCTGGACATGGATTTGGAAATGGAGGAGCTCCAGCGCGACGCCGACGAACGGAGGTTGACGCCGGTGGAGGAGTCTCCGGTGAACCTTCGCGCGTCCAGGGAGCTGAAGGTCTCCTTCGACGAACCCCTTTCCAATTCGACTCTCCTCGAACCGCAGACCGAGGCCTTCAGGAGAAGGCACAGCAAGGAATCGCCGACGATCACGGACTTCCAACGCCCTCCGCAGGTGCCGCAGTACGACCGTCGCCGCTCGCCTTCGCCGTCTCCCGTCAGCGACAGCGAGGTCCTTCGCTGCACCTCAAACGCCTCCTTCGAGAGAAACCTCTCCATGCAGAGAAAATCCGCGTTGTTGAAGGCCAAAACGAGATCCAGATTGCTGGACCCGCCAGAGGAATACGACAGGAGATCGGGCCGGGTCATGAAATCGGGTCAGCTCGTTTCCGGGTTTTTGGGGAAAAAGGGTGATGATGAGGAGGACGACCCGTTTCTGGAAGAGGATATTCCTGATGAGTTTACCAAGACCCATTTCAGCTTCTGGATTCTTCTGGAGTGGGTGAGTTTGATTCTGATCATTGGGTTGTTGATTACCACCCTCTGCATTCCCCTTCTAAGGAGGAAGCATCTGTGGCAGCTCAAGTTGTGGAAATGGGAGGTTATGGTTCTGGTTTTGATCTGTGGGAGATTGGTGTCTGATTGGGTTGTTAGAATTGCTGTGTTCTTCATTGAGAGGAACTTCCTCTTGAGGAAGAGGGTGTTGTATTTTGTGTACGGTGTGAGGAAGGCCGTTCAGAATTGTGTTTGGTTGGGGCTGGTGTTGATTGCATGGCATTTGTTGTTTGACCAGAGGGTGCAGAGGGAGACCAACAGTGATATCCTTGAGTATGTTAACAAGGTGTTGGTGTGTTTCCTTGTGGGGACTCTGGTGTGGTTGCTCAAGACTCTCATGGTTAAGGTCTTGGCCTCTTCTTTCCATGTCAGTACCTACTTTGATAGGATTCAGGAGTCACTGTTCAATCAGTTTGTGATTGAGACGCTTTCGGGGCCTCCATTGGTGGAGATTCAGAGGGCTGAGGAGGAGGAGGAGAGGCTTGCTGATGAGGTTCAGAAGCTGCAAAATGCTGGGGTTACCATACCCCCTGACCTCAGAGAAACTGCTTTTTCCAATATCAAGAGTGGGAGGATCAGGAGTGGAGTGCTCAAGAGCCCCAGAGGCAAGAGTGGCAAGTTTTCCCGGCCTCTTTCCAAGAGGTCTGATGATGGTAATGTCATCACCATTGATAACCTGCATAAGCTCAACCCCAAGAATATCTCTGCCTGGAATATGAAAAGGTTGATGAACATGGTCCGGCATGGGGCCTTGAGTACCTTGGATGAACAGATAATTGATAGCGCCAATGATGATGAGAATGCCACGCAAATTAGAAGTGAAAATGAGGCAAAAGCTGCTGCTAAGAAAATATTTCAGAATGTTGCTAGGCGTGGGTGCAGGTATATATACCCGGATGACTTGATGCGATTTATGCAAGAAGACGAAGCTGCAAAAACCATGAATCTCTTCGAAGGAGCATCTGATTCTGGGAGAATAGGCAAAGGAGCCTTGAAGAACTGGGTGGTCAATGCCTTCAGGGAAAGGAGAGCACTTGCTTTGACGCTGAATGACACAAAAACGGCAGTGAACAAACTTCACAGAATGCTCAATTTTATAGTTGCAATTGTTGTACTGATTATTTGGCTCTTGATATTGGAACTTGCCACCACCAAATTTCTTGTCTTTTTGAGTTCCCAGGTTGTCTTGGTTACATTTATATTTGGAAACACCTGCAAGACCATATTTGAAGCAATTATTTTCCTATTTGTCATGCACCCATTTGACGTGGGAGATAGATGTGAAATTGATGGGGTTCAGATGGTGGTAGAAGAAATGAACATATTGACAACCATATTTCTGAAGTTTGATAATCATAAGGTGATCATCCCCAACAGTGTCCTTGCTACCAAGGCTATATTTAACTATTACAGGAGTCCTGACATGTCAGATATTATCGAATTCTATGTACACATATGCACCCCAGTTGAAAAGATTTCACTTATTAAACACAGAATAAACAGTTTCTGTGAAAACAAGAAGGAGCACTGGTATCCTTCACCTATCATAGTAATCAGGGATTATGATCAATTAAACATGGTGAAAATGGCTATCTGGCCAAATCATAAAATGAACTTCCAAGATCAGGGAGAAAGGTATATAAGGAGATCCCTTTTGCTTGAAGAGTTGCTCAAGACTTTCAGGGAGCTGGACCTTAACTACCGTCTCCTTCCCATGGACATTAACGTGAGATCAGTGCCTACCTCTTCTGAACGGCTTCCACCTAGTTGGTCAACAATTCCAGGTTGA 2754 0.484 MQSIRKSFKSYGSFKQSKRFSGAGNHDSDHEQLPILLDQESHRHSAMPAGDYVVKIDDGANPPQGNRIWRESSYEFWKGESSSSAAAANDQSFDFRQTEDPPSQLIGRFLHKQRASGEMQLDMDLEMEELQRDADERRLTPVEESPVNLRASRELKVSFDEPLSNSTLLEPQTEAFRRRHSKESPTITDFQRPPQVPQYDRRRSPSPSPVSDSEVLRCTSNASFERNLSMQRKSALLKAKTRSRLLDPPEEYDRRSGRVMKSGQLVSGFLGKKGDDEEDDPFLEEDIPDEFTKTHFSFWILLEWVSLILIIGLLITTLCIPLLRRKHLWQLKLWKWEVMVLVLICGRLVSDWVVRIAVFFIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHLLFDQRVQRETNSDILEYVNKVLVCFLVGTLVWLLKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQRAEEEEERLADEVQKLQNAGVTIPPDLRETAFSNIKSGRIRSGVLKSPRGKSGKFSRPLSKRSDDGNVITIDNLHKLNPKNISAWNMKRLMNMVRHGALSTLDEQIIDSANDDENATQIRSENEAKAAAKKIFQNVARRGCRYIYPDDLMRFMQEDEAAKTMNLFEGASDSGRIGKGALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVAIVVLIIWLLILELATTKFLVFLSSQVVLVTFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLKFDNHKVIIPNSVLATKAIFNYYRSPDMSDIIEFYVHICTPVEKISLIKHRINSFCENKKEHWYPSPIIVIRDYDQLNMVKMAIWPNHKMNFQDQGERYIRRSLLLEELLKTFRELDLNYRLLPMDINVRSVPTSSERLPPSWSTIPG* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00258 917 Coils Coil 470 493 - -
Phac7g00258 917 MobiDBLite consensus disorder prediction 1 21 - -
Phac7g00258 917 MobiDBLite consensus disorder prediction 124 143 - -
Phac7g00258 917 FunFam Predicted mechanosensitive ion channel 742 791 - -
Phac7g00258 917 Pfam Mechanosensitive ion channel 684 839 IPR006685 GO:0016020|GO:0055085
Phac7g00258 917 PIRSF Memb_At2g17000 38 917 IPR016688 -
Phac7g00258 917 MobiDBLite consensus disorder prediction 124 216 - -
Phac7g00258 917 SUPERFAMILY Sm-like ribonucleoproteins 732 791 IPR010920 -
Phac7g00258 917 Gene3D - 742 791 IPR023408 -
Phac7g00258 917 MobiDBLite consensus disorder prediction 1 35 - -
Phac7g00258 917 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 38 912 IPR016688 -
Phac7g00258 917 MobiDBLite consensus disorder prediction 201 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00258 Phac-Chr7 1226315 1230566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00258 51 914 Mechanosensitive Ion Channel Family AT1G78610 56.656 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00258 K22048 - gmx:102665658 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00258 7 1226315 1230566 Phac7g00258 7 1226315 1230566 ECH