Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00249 ATGCGACAAGAGAACACAGTCACCGTGGATTCAAACCCCACAGAGCAAAATACTCAATCTTTGGATTTTGATGCTGAGTGTGAGGCCGATGAGACCAAAGCAATCGACTTCGCTGGAAAAGATGATGATGGGGCAGGAGGGTATTCTTCTGTTGCAGAAGGTGTGAAAAGGAAGCGTGACAGAAAGAGTGAAGAGGAGGAGGGTATGGGAACGATGTTAGAGGGCCATTTGTTGGAGGAGAACAATGGTCAAGACGGAAACCATGGTGAAAATGGTGGGGTTGGAGTTTCTTCTTCTGTTCAAGGTGTGAAAAAGAAGCGTGGCAGAAAGAGTAAAAAAGAGAAGGAAGAGATGGAAATGAAGTTGTCAGGGGGCAATTTGTTGGAGAAGAATGGTGTTGAATACGTTAGCCATGGTGAAAATGGTGGGGTAGGAGATTCTTCTGTTCCACGTGTGAAAAAGAAGCGTGGCAGAAAGAGTAAGAAAGAGAAGGAAGACATGGAATTGAAGATGTCAGGGGGCAATTTGTTGGAGAAGAAGGGTGGTTCTTCTTCTGTTCAAGAAGGTGTGAGAGAGAAGCCTGGGAGTAATGGCGGGGTTGCTTATAAGAGACGTGGGAGAAAAAGAAAGGTTGTTAAGGAAGGTGACGACGAGTTTGAAACGCCTGCGTTTTTTTCAGGAAGTGGCAGTCAGAAACAATATAGTCTTAGAAGCCCTAAAGTCAAAATAGAAGTGGTAATGCCAAAAATCAACAAGAAGGATAGTAAGTTGACTGAAGAACAGTCCTCAATGTGCCATCAATGTCAGAGAAATGATAAAGGCAGGGTTGTGAGGTGCACAAAGTGTAATAGGAAAAGATTTTGCGTACCCTGTATACTAAATTGGTATCCTCATTTGGAAGAGGATTACATTGCTGAGGCATGTCCTGTGTGCCGTGGTAATTGCAACTGCAAAGCATGCTTGAGATCTGATGTACTGATTAAAGAAATGAAGAAAAAAACAAAAACCAATAAAGATGAGAAGGTTGAACTGTCTACGTATTTGCTGCAAGTACTTCTTCCGTATTTAAGATTGTTGGATGAAGAACAAATGGCTGAGAAAGAGACAGAAGCTAAGATACAGGGGATCTCAATCTCAGAGATAAATGTAGTACATGCAGATTACTCTATTAAGGAGCGTGTATATTGTGACAACTGCAAAACGTCAATATTTGATTACCACAGAAGCTGTACAAAATGTTCTTTTGATCTTTGTCTCATCTGTTGCCGCGAGCTTCGTAGTGGGCAGCTTGTAGGTGGTGCAGATCCAATTATGTTGGAGTTTTCCTGGCAAGGTCGTGGTTACTTGCATGGTGAAAAAGTAAATAAAAGGGTAAACCAAACTGAATCAAATGATGTTGCTAAGCCTGTAGTTCGTGAATGGTCAAGATCTGGATGGCATGCAGAAAGTAATGGTGGCATTCCTTGTCCAAAAGTCAGTGATGAATGTAATCATGGTTTTCTTGAACTGAGAAGTGTATTAGGTCAAAATTTTATTAGTGATTTGTTGTGTAAAGCAAATGAACTAGCACAAACATACGAGCTTGGGACCCCTGACAACTTCTGTTTGTGTTCAAGGCTTGATAGAAACACAGATGTTAGATATAATGGTATGAGGAAGGCTGCTTCCCGTGCAGATTCCAGTGACAACTATTTGTACTGTCCTAGGGCTGTACAACTACAAGAAGAGGATTTAGGGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTTAGCCATGTGATTGATTCTATGTCTGGCTTAAGCTGGGAACCCCTTGTCATGTGGCGTGCATTCCGTCAGATGACTAAGACCAAGCATGAACACCATTTGGATGTGAAGGCAATTGATTGCTTAGATTGGTGTGAGGGTGAAATTAATATTCACCAATTCTTTACTGGGTATACAAAAGCTCGTGAAGATTGGCTTAATTGGCCTCAGATATTGAAATTAAAAGACTGGCCACCTTCTAATTTATTTGAGGAACGCCTGCCTCGACATTGTGCTGAGTTCATATCTTCCTTGCCATTCAAGGAATATACTGATCCTCTTGGTGGTTTTCTTAACCTAGCTGTGAAATTGCCTGGAGAGTGTATAAAGCCAGACATGGGGCCAAAGACATATATTGCTTATGGATTTCCTCAGGAGCTTGGACGTGGTGACTCGGTGACTAAGCTCCACTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTTAAATTGGAACCAAAGCATCTTACTGCCATTGAGAAGTTGAAACAAAAGCACTTTGAGCAAGACAAAAGGGAGCTACTTAGTGATGATCAGGATGGAGAAACTAATGTTGACATGCATGATAATATATCTTCTGCCATAAATTCCTTGCAGAAGCAAAATAGTATCCAAGTTTTGGAAAGCAAAAGTGGATGTTGTGATGAGAAAGAAGATCAGTTTCATCAACCCTCTGTTGGTAGTGAGGTTGCCATTGCTAGTGAGGATGGTCTTTCATGCGGATCTGAGCTCAAAGAGGTTAACAAAATAAATATGAAGCAAGAAAGTGATATGTCGTTTGCAGGGGATGGTTCAGAAGGTGCTCTGTGGGATATTTTTCGGAGGCAGGATGTACCTAAATTGCAGGAGTATATGAGGAAGCATTTCAGAGAGTTTAGGCATATCCACTGCTCTCCTTTAAAGCAGGTTATTCACCCCATCCATGACCAGACCTTCTATTTGACCGTGGAGCATAAGAGGAAGCTTAAGGAGGAGTTCGGAATTGAGCCCTGGACATTCATTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCACCAGGTCAGAAATCTGAAGTCATGTATTAAGGTGGCATTGGATTTTGTTTCTCCTGAAAATGTTGGGGAGTGCTTTCGTTTGACAGAGGAATTTCGTACACTTCCTATAAACCATGGGTCTGCTGAGGACAAATTGGAGGTGAAAAAGATGACAATATATGCTATGCAAGATGTGATAACAAAATTGGAGAATGCAAGGTCTGAAGTAAATATACCTGTAACAGACAAAGGGGAGGTGAAAGTGTGA 3120 0.4176 MRQENTVTVDSNPTEQNTQSLDFDAECEADETKAIDFAGKDDDGAGGYSSVAEGVKRKRDRKSEEEEGMGTMLEGHLLEENNGQDGNHGENGGVGVSSSVQGVKKKRGRKSKKEKEEMEMKLSGGNLLEKNGVEYVSHGENGGVGDSSVPRVKKKRGRKSKKEKEDMELKMSGGNLLEKKGGSSSVQEGVREKPGSNGGVAYKRRGRKRKVVKEGDDEFETPAFFSGSGSQKQYSLRSPKVKIEVVMPKINKKDSKLTEEQSSMCHQCQRNDKGRVVRCTKCNRKRFCVPCILNWYPHLEEDYIAEACPVCRGNCNCKACLRSDVLIKEMKKKTKTNKDEKVELSTYLLQVLLPYLRLLDEEQMAEKETEAKIQGISISEINVVHADYSIKERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPIMLEFSWQGRGYLHGEKVNKRVNQTESNDVAKPVVREWSRSGWHAESNGGIPCPKVSDECNHGFLELRSVLGQNFISDLLCKANELAQTYELGTPDNFCLCSRLDRNTDVRYNGMRKAASRADSSDNYLYCPRAVQLQEEDLGHFQWHWEKGEPVIVSHVIDSMSGLSWEPLVMWRAFRQMTKTKHEHHLDVKAIDCLDWCEGEINIHQFFTGYTKAREDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTDPLGGFLNLAVKLPGECIKPDMGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLEPKHLTAIEKLKQKHFEQDKRELLSDDQDGETNVDMHDNISSAINSLQKQNSIQVLESKSGCCDEKEDQFHQPSVGSEVAIASEDGLSCGSELKEVNKINMKQESDMSFAGDGSEGALWDIFRRQDVPKLQEYMRKHFREFRHIHCSPLKQVIHPIHDQTFYLTVEHKRKLKEEFGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHGSAEDKLEVKKMTIYAMQDVITKLENARSEVNIPVTDKGEVKV* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00249 1039 Gene3D Cupin 564 998 - -
Phac7g00249 1039 MobiDBLite consensus disorder prediction 37 213 - -
Phac7g00249 1039 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 72 1025 IPR045109 GO:0032454|GO:0033169
Phac7g00249 1039 ProSiteProfiles JmjC domain profile. 698 990 IPR003347 -
Phac7g00249 1039 MobiDBLite consensus disorder prediction 1 22 - -
Phac7g00249 1039 SUPERFAMILY Clavaminate synthase-like 580 1014 - -
Phac7g00249 1039 MobiDBLite consensus disorder prediction 53 73 - -
Phac7g00249 1039 Pfam JmjC domain, hydroxylase 877 973 IPR003347 -
Phac7g00249 1039 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 260 325 IPR018866 -
Phac7g00249 1039 SMART cupin_9 679 990 IPR003347 -
Phac7g00249 1039 ProSiteProfiles Zinc finger RING-type profile. 265 312 IPR001841 -
Phac7g00249 1039 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00249 Phac-Chr7 1177724 1189244 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac7g00249 JmjC 9.8e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00249 K15601 - gmx:100805723 1424.45